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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTCGAGTTGTTCGAGCTGTTGCTGTTCTTGGAGGCCTACTTCAGATTTTTCTATTTATGTGCATGTGTGGGCTTACAGTATCAgtatgttttataattgtgattcatcctatttctgattttcttgtttgttattattcttatatcattttatagattaatgtggaattcaaatcacaaacaa...

Basic information

species Glycine max
transcript GLYMA17G34780.1
intron # 9
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA17G34780.1 (Glycine max), 5'ss of exon 9
lower sequence: AT5G11800.1 (Arabidopsis thaliana), 5'ss of exon 9
CTTCGAGTTGTTCGAGCTGTTGCTGTTCTTGGAGGCCTACTTCAGATTTTTCTATTTATGTGCATGTGTGGGCTTACAGTATCAgtatgtt--ttataattgtgattcatcctatttctgattttcttgtttgttattattcttatatcattttatagattaatgtggaattcaaatcacaaacaa
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CTTAAAGTTGTTCGATCAGTTGCTGTTCTGGGAGGCCTTCTTCAAATTCTTCTATTCATGTTCTTGTGCGGTATCACAGTGTCGgtgcgtcacttttttttatcagtggttctggaaaaaaagttat-gctttctgtttgaatcgtagaaaaatgagtcctgctgtctcttttattctttgagag-