1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...caggtactaaagttttttcactagggactgattcttaaatgagtgtcacctgtaaggaccaaattattgatttaaataaaggatttcattttcaatacagGTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTCTTTTAGTGCCAAACTTGGATTTAGTGTTCTTAAATTGGATGAGTTAGTG
species | Glycine max |
transcript | GLYMA17G34750.2 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AGTGATCGTGACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAG GTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTCEST: gi|6747524|gb|AW317980.1|AW317980
genomic: AGTGATCGTGACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAGgtattctctt ... ttcaatacagGTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTC
EST: AGTGATCGTGACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAG GTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTCEST: gi|192327694|gb|FK021343.1|FK021343
genomic: AGTGATCGTGACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAGgtattctctt ... ttcaatacagGTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTC
EST: AGTGATCGTGACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAG GTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTCEST: gi|192333679|gb|FK026896.1|FK026896
genomic: AGTGATCGTGACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAGgtattctctt ... ttcaatacagGTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTC
EST: AGTGATCGTGACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAG GTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTCEST: gi|19934413|gb|BQ079443.1|BQ079443
genomic: AGTGATCGTGACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAGgtattctctt ... ttcaatacagGTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTC
EST: AGTGATCGTGACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAG GTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTCEST: gi|192331963|gb|FK024507.1|FK024507
genomic: AGTGATCGTGACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAGgtattctctt ... ttcaatacagGTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTC
EST: AGTGATCGTGACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAG GTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTCEST: gi|254327341|gb|GR836950.1|GR836950
genomic: AGTGATCGTGACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAGgtattctctt ... ttcaatacagGTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTC
EST: GACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAG GTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTCEST: gi|12773515|gb|BG238442.1|BG238442
genomic: GACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAGgtattctctt ... ttcaatacagGTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTC
EST: GACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAG GTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTCEST: gi|19936734|gb|BQ080993.1|BQ080993
genomic: GACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAGgtattctctt ... ttcaatacagGTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTC
EST: AGTGATCGTGACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAG GTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTCEST: gi|9258809|gb|BE346956.1|BE346956
genomic: AGTGATCGTGACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAGgtattctctt ... ttcaatacagGTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTC
EST: TGATCGTGACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAG GTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTC
genomic: TGATCGTGACAACCAAGAGGATCCACCAAAACAAACCTTGCCTGATAGgtattctctt ... ttcaatacagGTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTC
tcacctgtaaggaccaaattattgatttaaataaaggatttcattttcaatacagGTTTATCGGAATGAAAGCTGCTATTTTGACCAACAATTCAAGCTTGAAGTCTTTTAGTGCCAAACTTGGATTTAGTGTTCTTAAATTGGATGAGTTAGTG
tattgat putative branch site (score: 3)
tttcattttc putative PPT
aaattattgatttaaa TA-rich tract