Skip to another splice site:
1  
 5'  3'   
2  
 5'  3'   
3  
 5'  3'   
4  
 5'  3'   
5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGGTTAGCTCGTTCCATCGATTCATCGCACTCCCACTTTCACTCTCTCGCTTCTCTATCTTCCTGCGGTTTTTTGAGTCTCCCAAATTCTCCCCCATCAGgttcccttcttctcaatccatgacccctttgtgtttgtaataatgtctaacacacgcttctcaattattattttttcccatttgtgcccctgccggattcaaattcacttgaatatgtagttttcag

Basic information

species Glycine max
transcript GLYMA17G34750.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193728565|gb|FK667163.1|FK667163
EST:     TTCTCTATCTTCCTGCGGTTTTTTGAGTCTCCCAAATTCTCCCCCATCAG                         AAAGCGAGGATGAGAGGACAGTTAGAGAATTTGCAGTGCTGCTGGATGCAT
genomic: TTCTCTATCTTCCTGCGGTTTTTTGAGTCTCCCAAATTCTCCCCCATCAGgttcccttct ... tagttttcagAAAGCGAGGATGAGAGGACAGTTAGAGAATTTGCAGTGCTGCTGGATGCAT
EST: gi|9898993|gb|BE607961.1|BE607961
EST:     TTCTCTATCTTCCTGCGGTTTTTTGAGTCTCCCAAATTCTCCCCCATCAG                         AAAGCGAGGATGAGAGGACAGTTAGAGAATTTGCAGTGCTGCTGGATGCAT
genomic: TTCTCTATCTTCCTGCGGTTTTTTGAGTCTCCCAAATTCTCCCCCATCAGgttcccttct ... tagttttcagAAAGCGAGGATGAGAGGACAGTTAGAGAATTTGCAGTGCTGCTGGATGCAT
EST: gi|193579251|gb|FK533877.1|FK533877
EST:     TTCTCTATCTTCCTGCGGTTTTTTGAGTCTCCCAAATTCTCCCCCATCAG                         AAAGCGAGGATGAGAGGACAGTTAGAGAATTTGCAGTGCTGCTGGATGCAT
genomic: TTCTCTATCTTCCTGCGGTTTTTTGAGTCTCCCAAATTCTCCCCCATCAGgttcccttct ... tagttttcagAAAGCGAGGATGAGAGGACAGTTAGAGAATTTGCAGTGCTGCTGGATGCAT
EST: gi|192327694|gb|FK021343.1|FK021343
EST:     TTCTCTATCTTCCTGCGGTTTTTTGAGTCTCCCAAATTCTCCCCCATCAG                         AAAGCGAGGATGAGAGGACAGTTAGAGAATTTGCAGTGCTGCTGGATGCAT
genomic: TTCTCTATCTTCCTGCGGTTTTTTGAGTCTCCCAAATTCTCCCCCATCAGgttcccttct ... tagttttcagAAAGCGAGGATGAGAGGACAGTTAGAGAATTTGCAGTGCTGCTGGATGCAT
EST: gi|192333679|gb|FK026896.1|FK026896
EST:     TTCTCTATCTTCCTGCGGTTTTTTGAGTCTCCCAAATTCTCCCCCATCAG                         AAAGCGAGGATGAGAGGACAGTTAGAGAATTTGCAGTGCTGCTGGATGCAT
genomic: TTCTCTATCTTCCTGCGGTTTTTTGAGTCTCCCAAATTCTCCCCCATCAGgttcccttct ... tagttttcagAAAGCGAGGATGAGAGGACAGTTAGAGAATTTGCAGTGCTGCTGGATGCAT
EST: gi|192331963|gb|FK024507.1|FK024507
EST:     TTCTCTATCTTCCTGCGGTTTTTTGAGTCTCCCAAATTCTCCCCCATCAG                         AAAGCGAGGATGAGAGGACAGTTAGAGAATTTGCAGTGCTGCTGGATGCAT
genomic: TTCTCTATCTTCCTGCGGTTTTTTGAGTCTCCCAAATTCTCCCCCATCAGgttcccttct ... tagttttcagAAAGCGAGGATGAGAGGACAGTTAGAGAATTTGCAGTGCTGCTGGATGCAT