1 5' 3' | 2 5' 3' |
TAGGCTGGCATTGTCAGTTGATTCAAATGATGTGAGAGCACTGTATAATTGGGGTCTTGCTCTTTCTTTCCGAGGCCAATTGATAGCAGATATTGGTCCGgtatgcattattcttgacatcattaaattacctgtttcagctcttcaattgctttgtttgggtgttgtctttgctcattagattacatgttagaatgctg...
species | Glycine max |
transcript | GLYMA17G12650.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCAGATATTGGTCCG GGTGCTGCTTTTGAGGCTGAAAGAGTGTTCTTGGCTGCAATTGACAAGTTCEST: gi|51337969|gb|CO981835.1|CO981835
genomic: GCAGATATTGGTCCGgtatgcatta ... aataccacagGGTGCTGCTTTTGAGGCTGAAAGAGTGTTCTTGGCTGCAATTGACAAGTTC
EST: GGGGTCTTGCTCTTTCTTTCNNAGGCCAATTGATAGCAGATATTGGTCCG GGTGCTGCTTTTGAGGCTGAAAGAGTGTTCTTGGCTGCAATTGACAAGTTGEST: gi|16105880|gb|BI893620.1|BI893620
genomic: GGGGTCTTGCTCTTTCTTTCCGAGGCCAATTGATAGCAGATATTGGTCCGgtatgcatta ... aataccacagGGTGCTGCTTTTGAGGCTGAAAGAGTGTTCTTGGCTGCAATTGACAAGTTC
EST: GGGGTCTTGCTCTTTCTTTCCGAGGCCAATTGATAGCAGATATTGGTCCG GGTGCTGCTTTTGAGGCTGAAAGAGTGTTCTTGGCTGCAATTGACAAGTTC
genomic: GGGGTCTTGCTCTTTCTTTCCGAGGCCAATTGATAGCAGATATTGGTCCGgtatgcatta ... aataccacagGGTGCTGCTTTTGAGGCTGAAAGAGTGTTCTTGGCTGCAATTGACAAGTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAGGCTGGCATTGTCAGTTGATTCAAATGATGTGAGAGCACTGTATAATTGGGGTCTTGCTCTTTCTTTCCGAGGCCAATTGATAGCAGATATTGGTCCGgtatgcattattcttgacatcattaaattacctgtttcagctcttcaattgctttgtttgggtgttgtctttgctcattagattacatgttagaatgctg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttgggtg