1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CAAGGCAGTTTCACTTCAATTATACTACTCCAGATCGCTCTCGGCAGGAGATGTTAAGTACAATGACTCCTCGTCCTACTGAGCATTGGCCTTTTTTGTGgtaggtgtttctgacagtaaggtccgatttggataaacttgtctatagacacttatagggaaagaaaataagggaaaatgaattaaggttttttcataaa...
species | Glycine max |
transcript | GLYMA16G23250.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ATGTTAAGTACAATGACTCCTCGTCCTACTGAGCATTGGCCTTTTTTGTG CAAGGGTGATGGGAAGGGAGTTAGGATTCCAAGCCCACACACACCTAAAGCEST: gi|9984194|gb|BE658302.1|BE658302
genomic: ATGTTAAGTACAATGACTCCTCGTCCTACTGAGCATTGGCCTTTTTTGTGgtaggtgttt ... atttttgcagCAAGGGTGATGGGAAGGGAGTTAGGATTCCAAGCCCACACACACCTAAAGC
EST: ATGTTAAGTACAATGACTCCTCGTCCTACTGAGCATTGGCCTTTTTTGTG CAAGGGTGATGGGAAGGGAGTTAGGATTCCAAGCCCACACACACCTAAAGCEST: gi|18040477|gb|BM308771.1|BM308771
genomic: ATGTTAAGTACAATGACTCCTCGTCCTACTGAGCATTGGCCTTTTTTGTGgtaggtgttt ... atttttgcagCAAGGGTGATGGGAAGGGAGTTAGGATTCCAAGCCCACACACACCTAAAGC
EST: ATGTTAAGTACAATGACTCCTCGTCCTACTGAGCATTGGCCTTTTTTGTG CAAGGGTGATGGGAAGGGAGTTAGGATTCCAAGCCCACACACACCTAAAGCEST: gi|5677378|gb|AI938508.1|AI938508
genomic: ATGTTAAGTACAATGACTCCTCGTCCTACTGAGCATTGGCCTTTTTTGTGgtaggtgttt ... atttttgcagCAAGGGTGATGGGAAGGGAGTTAGGATTCCAAGCCCACACACACCTAAAGC
EST: ATGTTAAGTACAATGACTCCTCGTCCTACTGAGCATTGGCCTTTTTTGTG CAAGGGTGATGGGAAGGGAGTTAGGATTCCAAGCCCACACACACCTAAAGCEST: gi|58019224|gb|CX705966.1|CX705966
genomic: ATGTTAAGTACAATGACTCCTCGTCCTACTGAGCATTGGCCTTTTTTGTGgtaggtgttt ... atttttgcagCAAGGGTGATGGGAAGGGAGTTAGGATTCCAAGCCCACACACACCTAAAGC
EST: ATGTTAAGTACAATGACTCCTCGTCCTACTGAGCATTGGCCTTTTTTGTG CAAGGGTGATGGGAAGGGAGTTAGGATTCCAAGCCCACACACACCTAAAGCEST: gi|7029866|gb|AW459649.1|AW459649
genomic: ATGTTAAGTACAATGACTCCTCGTCCTACTGAGCATTGGCCTTTTTTGTGgtaggtgttt ... atttttgcagCAAGGGTGATGGGAAGGGAGTTAGGATTCCAAGCCCACACACACCTAAAGC
EST: GTTAAGTACAATGACTCCTCGTCCTACTGAGCATTGGCCTTTTTTGTG CAAGGGTGATGGGAAGGGAGTTAGGATTCCAAGCCCACACACACCTAAAGCEST: gi|15203692|gb|BI426460.1|BI426460
genomic: GTTAAGTACAATGACTCCTCGTCCTACTGAGCATTGGCCTTTTTTGTGgtaggtgttt ... atttttgcagCAAGGGTGATGGGAAGGGAGTTAGGATTCCAAGCCCACACACACCTAAAGC
EST: ATGACTCCTCGTCCTACTGAGCATTGGCCTTTTTTGTG CAAGGGTGATGGGAAGGGAGTTAGGATTCCAAGCCCACACACACCTAAAGC
genomic: ATGACTCCTCGTCCTACTGAGCATTGGCCTTTTTTGTGgtaggtgttt ... atttttgcagCAAGGGTGATGGGAAGGGAGTTAGGATTCCAAGCCCACACACACCTAAAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAGGCAGTTTCACTTCAATTATACTACTCCAGATCGCTCTCGGCAGGAGATGTTAAGTACAATGACTCCTCGTCCTACTGAGCATTGGCCTTTTTTGTGgtaggtgtttctgacagtaaggtccgatttggataaacttgtctatagacacttatagggaaagaaaataagggaaaatgaattaaggttttttcataaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggaaagaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaaatga