1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GATCCTGCAGAGGCTGACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTTgtaagcatgcaatactttatatttgcaaaacagtatatgggttcccttcatcttttaccttctaaagttacttctcttcaagacattctgtcatgtagtt...
species | Glycine max |
transcript | GLYMA13G19950.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTT CATAAAACTATTGATAGTGTGCTEST: gi|192306907|gb|FK002629.1|FK002629
genomic: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTTgtaagcatgc ... ttataaacagCATAAAACTATTGATAGTGTGCT
EST: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTT CATAAAACTATTGATAGTGTGTTGGCTAGAGGGGAGAAGCTGGACAGCTTAEST: gi|192299559|gb|FG987720.1|FG987720
genomic: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTTgtaagcatgc ... ttataaacagCATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTA
EST: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTT CATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTAEST: gi|151393215|gb|EV263090.1|EV263090
genomic: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTTgtaagcatgc ... ttataaacagCATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTA
EST: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTT CATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTAEST: gi|192306908|gb|FK002630.1|FK002630
genomic: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTTgtaagcatgc ... ttataaacagCATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTA
EST: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTT CATAAAACTATTGATAGTGTGTTGGCTAGAGGGGAGAAGCTGGACAGCTTAEST: gi|151407036|gb|EV275591.1|EV275591
genomic: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTTgtaagcatgc ... ttataaacagCATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTA
EST: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTT CATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTAEST: gi|298197444|gb|HO044923.1|HO044923
genomic: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTTgtaagcatgc ... ttataaacagCATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTA
EST: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTT CATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTAEST: gi|213611777|gb|DB964781.1|DB964781
genomic: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTTgtaagcatgc ... ttataaacagCATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTA
EST: ACAAGTTGATGNAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTT CATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTAEST: gi|192294833|gb|FG987522.1|FG987522
genomic: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTTgtaagcatgc ... ttataaacagCATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTA
EST: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTT CATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTAEST: gi|208126796|gb|GD926054.1|GD926054
genomic: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTTgtaagcatgc ... ttataaacagCATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTA
EST: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTT CATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTAEST: gi|213602294|gb|DB958554.1|DB958554
genomic: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTTgtaagcatgc ... ttataaacagCATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTA
EST: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTT CATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTA
genomic: ACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTTgtaagcatgc ... ttataaacagCATAAAACTATTGATAGTGTGCTGGCTAGAGGGGAGAAGCTGGACAGTTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATCCTGCAGAGGCTGACAAGTTGATGAAAATTCAGAGAGAGTTGGATGAAACAAAAATCATCCTTgtaagcatgcaatactttatatttgcaaaacagtatatgggttcccttcatcttttaccttctaaagttacttctcttcaagacattctgtcatgtagtt
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