1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
AAGTTACACTCCACCTAGGTTTCTGCTGTGTGCTGTTACTGTAGCTGCAAACCATATAGCTCCGATTGAATCACTCTGAGTTCAATCTTCCTGTTTCATGgttcactctcccatctaaatctcatttttcgttatatgctttctggtcactttcacttcaattttttctccatgaaaagataaactatattattgtaaat...
species | Glycine max |
transcript | GLYMA12G08490.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACCATATAGCTCCGATTGAATCACTCTGAGTTCAATCTTCCTGTTTCATG TGGTTTAGCTTAGCGCATGACCTTAGGTGGGAGATAAGTCTGCTAGATTCAEST: gi|12773344|gb|BG238271.1|BG238271
genomic: ACCATATAGCTCCGATTGAATCACTCTGAGTTCAATCTTCCTGTTTCATGgttcactctc ... actttaccagTGGTTTAGCTTAGCGCATGACCTTAGGTGGGAGATAAGTCTGCTAGATTCA
EST: ACCATATAGCTCCGATTGAATCACTCTGAGTTCAATCTTCCTGTTTCATG TGGTTTAGCTTAGCGCATGACCTTAGGTGGGAGATAAGTCTGCTAGATTCA
genomic: ACCATATAGCTCCGATTGAATCACTCTGAGTTCAATCTTCCTGTTTCATGgttcactctc ... actttaccagTGGTTTAGCTTAGCGCATGACCTTAGGTGGGAGATAAGTCTGCTAGATTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGTTACACTCCACCTAGGTTTCTGCTGTGTGCTGTTACTGTAGCTGCAAACCATATAGCTCCGATTGAATCACTCTGAGTTCAATCTTCCTGTTTCATGgttcactctcccatctaaatctcatttttcgttatatgctttctggtcactttcacttcaattttttctccatgaaaagataaactatattattgtaaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaagata