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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CATCGTCGACGTTGCGATGGAGAAGGAAGCGAGTAGCACCGACGACCCTTCTTCGTTCACGCTTCTAGTGTCGTGTCCTTCCGGCCTTTCACCTTCACAGgttcgcttcacttcgaatcctcacgattcgccgtcaaaacgtgcgtcgttaacgaacttttttctatcgcttttgaag

Basic information

species Glycine max
transcript GLYMA12G08000.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192303763|gb|FG994573.1|FG994573
EST:     CTTCGTTCACGCTTCTAGTGTCGTGTCCTTCCGGCCTTTCACCTTCACAG                         GTTTCTGTGGCATTCAGCGACGCCTACGACCGGATCCCCCACTCTGACGTC
genomic: CTTCGTTCACGCTTCTAGTGTCGTGTCCTTCCGGCCTTTCACCTTCACAGgttcgcttca ... gcttttgaagGTTTCTGTGGCATTCAGCGACGCCTACGACCGGATCCCCCACTCTGACGTC
EST: gi|298179579|gb|HO028050.1|HO028050
EST:     CTTCGTTCACGCTTCTAGTGTCGTGTCCTTCCGGCCTTTCACCTTCACAG                         GTTTCTGTGGCATTCAGCGACGCCTACGACCGGATCCCCCACTCTGACGTC
genomic: CTTCGTTCACGCTTCTAGTGTCGTGTCCTTCCGGCCTTTCACCTTCACAGgttcgcttca ... gcttttgaagGTTTCTGTGGCATTCAGCGACGCCTACGACCGGATCCCCCACTCTGACGTC
EST: gi|151397388|gb|EV267261.1|EV267261
EST:     CTTCGTTCACGCTTCTAGTGTCGTGTCCTTCCGGCCTTTCACCTTCACAG                         GTTTCTGTGGCATTCAGCGACGCCTACGACCGGATCCCCCACTCTGACGTC
genomic: CTTCGTTCACGCTTCTAGTGTCGTGTCCTTCCGGCCTTTCACCTTCACAGgttcgcttca ... gcttttgaagGTTTCTGTGGCATTCAGCGACGCCTACGACCGGATCCCCCACTCTGACGTC