1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
AAACCTTTTTGGGTGGAAAGTATGCTGTGGAGATATCTTCGTCAGGTTACAAAAATTGGGTTTTCCTCGACCAAGCATTACCTGCTGATCTCATCAAGAGgtaaccctatgtgaacatgaaccgtgtaaataaatttatatctgacacaaccctacttcatgcaagagttctatgaacttaagcatgaaaaatgcaatgg...
species | Glycine max |
transcript | GLYMA08G20190.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: AAAAATTGGGTTTTCCTCGACCAAGCATTACCTGCTGATCTCATCAAGAG AGGAATGGCTATTGAGGATTCATCTTGTCCCAACGGCCTTCGTCTTGTGATEST: gi|6454188|gb|AW184801.1|AW184801
genomic: AAAAATTGGGTTTTCCTCGACCAAGCATTACCTGCTGATCTCATCAAGAGgtaaccctat ... gatgattaagAGGAATGGCTATTGAGGATTCATCTTGTCCCAACGGCCTTCGTCTTGTGAT
EST: AAAAATTGGGTTTTCCTCGACCAAGCATTACCTGCTGATCTCATCAAGAG AGGAATGGCTATTGAGGATTCATCTTGTCCCAACGGCCTTCGTCTTGTGATEST: gi|254329008|gb|GR833380.1|GR833380
genomic: AAAAATTGGGTTTTCCTCGACCAAGCATTACCTGCTGATCTCATCAAGAGgtaaccctat ... gatgattaagAGGAATGGCTATTGAGGATTCATCTTGTCCCAACGGCCTTCGTCTTGTGAT
EST: AAAAATTGGGTTTTCCTCGACCAAGCATTACCTGCTGATCTCATCAAGAG AGGAATGGCTATTGAGGATTCATCTTGTCCCAACGGCCTTCGTCTTGTGATEST: gi|17519182|gb|BM188224.1|BM188224
genomic: AAAAATTGGGTTTTCCTCGACCAAGCATTACCTGCTGATCTCATCAAGAGgtaaccctat ... gatgattaagAGGAATGGCTATTGAGGATTCATCTTGTCCCAACGGCCTTCGTCTTGTGAT
EST: AAAAATTGGGTTTTCCTCGACCAAGCATTACCTGCTGATCTCATCAAGAG AGGAATGGCTATTGAGGATTCATCTTGTCCCAACGGCCTTCGTCTTGTGAT
genomic: AAAAATTGGGTTTTCCTCGACCAAGCATTACCTGCTGATCTCATCAAGAGgtaaccctat ... gatgattaagAGGAATGGCTATTGAGGATTCATCTTGTCCCAACGGCCTTCGTCTTGTGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAACCTTTTTGGGTGGAAAGTATGCTGTGGAGATATCTTCGTCAGGTTACAAAAATTGGGTTTTCCTCGACCAAGCATTACCTGCTGATCTCATCAAGAGgtaaccctatgtgaacatgaaccgtgtaaataaatttatatctgacacaaccctacttcatgcaagagttctatgaacttaagcatgaaaaatgcaatgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT