Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|58021949|gb|CX708690.1|CX708690EST: TCCATGGAGCCATGTTTGCAGCACTTTGCCAGAGGAACAGCCTGAAACAT GTGGATCCGGGATTTTTAATTCCATGTTTGGAGGAGGTTGTGATCACAGTG
genomic: TCCATGGAGCCATGTTTGCAGCACTTTGCCAGAGGAACAGCCTGAAACATgtaaattcat ... tcatttgcagGTGGATCCGGGATTTTTAATTCCATGTTTGGAGGAGGTTGTGATCACAGTG
EST:
gi|20814326|gb|BQ298804.1|BQ298804EST: TCCATGGAGCCATGTTTGCAGCACTTTGCCAGAGGAACAGCCTGAAACAT GTGGATCCGGGATTTTTAATTCCATGTTTGGAGGAGGTTGTGATCACAGTG
genomic: TCCATGGAGCCATGTTTGCAGCACTTTGCCAGAGGAACAGCCTGAAACATgtaaattcat ... tcatttgcagGTGGATCCGGGATTTTTAATTCCATGTTTGGAGGAGGTTGTGATCACAGTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CGATTTTGTTGATTTTTTCAACAACCATCCCAAGCTGCGCAAGTTTGACATCCATGGAGCCATGTTTGCAGCACTTTGCCAGAGGAACAGCCTGAAACATgtaaattcataataacattttgatgttacgaatctgatttaggtggttgttctatgaaatcttatctaatgatgatgttcatttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA