1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GTCATGGAAAGTGGTGATGTTCCTCATGTTTTGGCCGTTGATGACAACCTTATTGATCGCAAACTCGTTGAGAAACTCCTGAGGAATTCTTCTTGCAAAGgtacacctagctagcaaccgctatctattcttcttcttcttcttcttctaaaactggctagtgttgtacgtttcttttgtggggagaataaaagtgttca...
species | Glycine max |
transcript | GLYMA04G40100.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TATTGATCGCAAACTCGTTGAGAAACTCCTGAGGAATTCTTCTTGCAAAG TTACAACTGCAGAAAATGGGCCAAGGGCATTGGAGTTATTGGGCTTGACAAEST: gi|26268490|gb|CA819553.1|CA819553
genomic: TATTGATCGCAAACTCGTTGAGAAACTCCTGAGGAATTCTTCTTGCAAAGgtacacctag ... tttgctgcagTTACAACTGCAGAAAATGGGCCAAGGGCATTGGAGTTATTGGGCTTGACAA
EST: TATTGATCGCAAACTCGTTGAGAAACTCCTGAGGAATTCTTCTTGCAAAG TTACAACTGCAGAAAATGGGCCAAGGGCATTGGAGTTATTGGGCTTGACAAEST: gi|151395777|gb|EV265654.1|EV265654
genomic: TATTGATCGCAAACTCGTTGAGAAACTCCTGAGGAATTCTTCTTGCAAAGgtacacctag ... tttgctgcagTTACAACTGCAGAAAATGGGCCAAGGGCATTGGAGTTATTGGGCTTGACAA
EST: TATTGATCGCAAACTCGTTGAGAAACTCCTGAGGAATTCTTCTTGCAAAG TTACAACTGCAGAAAATGGGCCAAGGGCATTGGAGTTATTGGGCTTGACAAEST: gi|10255796|gb|BE823562.1|BE823562
genomic: TATTGATCGCAAACTCGTTGAGAAACTCCTGAGGAATTCTTCTTGCAAAGgtacacctag ... tttgctgcagTTACAACTGCAGAAAATGGGCCAAGGGCATTGGAGTTATTGGGCTTGACAA
EST: ATTGATCGCAAACTCGTTGAGAAACTNNNGAGGAATNNNNCNTGCAAAG TTACAACTGCAGAAAATGGGCCAAGGGCATTGGAGTTATTGGGCTTGACAA
genomic: ATTGATCGCAAACTCGTTGAGAAACTCCTGAGGAATTCTTCTTGCAAAGgtacacctag ... tttgctgcagTTACAACTGCAGAAAATGGGCCAAGGGCATTGGAGTTATTGGGCTTGACAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCATGGAAAGTGGTGATGTTCCTCATGTTTTGGCCGTTGATGACAACCTTATTGATCGCAAACTCGTTGAGAAACTCCTGAGGAATTCTTCTTGCAAAGgtacacctagctagcaaccgctatctattcttcttcttcttcttcttctaaaactggctagtgttgtacgtttcttttgtggggagaataaaagtgttca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggggaga