Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gagattgctatattttgtgtggatagactctgattatctgcatataaaattgttttatggtaacactcttgtttgatgagtttattgatctctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGAGTAGGAGCTCCTGCCCGAGCTTAAAAGAAAATTCCAAGTTTTTGGGGCT

Basic information

species Glycine max
transcript GLYMA04G39940.1
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA04G39940.1 (Glycine max), 3'ss of exon 4
lower sequence: Vv13s0067g02700.t01 (Vitis vinifera), 3'ss of exon 5
gagattgctatattttgtgtggatagactctgattatctgcatataaaattgttttatggtaacactcttgt--ttga-tgagtttattgatctctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGAGTAGGAGCTCCTGCCCGAGCTTAAAAGAA-AATTCCAAGTTTTTGGGGCT-----------
   |||| |    ||  ||   |||     ||   || |          ||  |||||  |      | |||  |||| | | ||| |   |  ||||  |||||||||   ||||         |||||||||||||||| |||||||||||   |||||||||||  ||  | | | | ||  |     | ||  |  | |            
---attggtggtgttaatgactatatttattggaaatgtttgagctttcttagtttattttcttctgcatgtatttgagtcaatttctgttttactttttcagGATGATATGCCAA---------AGCCTGGTCAAGCCCCTCGTCCTGCTGG---AGGAGCTCCTGTTCGCACCTGATAAAACGAAGTTGATTTCCTCTGTCATTCTGCTTTCA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|17021382|gb|BM092416.1|BM092416
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|31459613|gb|CD401641.1|CD401641
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|13481601|gb|BG510944.1|BG510944
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|208028900|gb|GD828814.1|GD828814
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTTATCAGACGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|58019087|gb|CX705829.1|CX705829
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|254317610|gb|GR826594.1|GR826594
EST:     GCACTGAGAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|8285663|gb|BE023222.1|BE023222
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|58022257|gb|CX708998.1|CX708998
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|7686487|gb|AW757135.1|AW757135
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|31470437|gb|CD412465.1|CD412465
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|4307186|gb|AI444011.1|AI444011
EST:     GCACTGATAGGAGANAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCC
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCC
EST: gi|38191905|gb|CF921111.1|CF921111
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|13791368|gb|BG653959.1|BG653959
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|208136980|gb|GD937602.1|GD937602
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|7041609|gb|AW471503.1|AW471503
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|9900681|gb|BE609649.1|BE609649
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|20449731|gb|BQ253847.1|BQ253847
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|16348589|gb|BI974184.1|BI974184
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|31472287|gb|CD414315.1|CD414315
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|21256861|gb|BQ453749.1|BQ453749
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|213594186|gb|DB963783.1|DB963783
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|31305403|gb|CD390606.1|CD390606
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|7145993|gb|AW507915.1|AW507915
EST:     CACTGATAGGAGAAAGCGTGAGCCTGCACAGCGATTCATCAGGCGCTAGG                         -ATGATGCACCAAGGCCTGGTCAGCCTGGTCAATCCCCACGTCCTGCTGG
genomic: CACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGC-AGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGG
EST: gi|193398592|gb|FK361602.1|FK361602
EST:     GAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|208272614|gb|GE067940.1|GE067940
EST:     ATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: ATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|7590469|gb|AW706221.1|AW706221
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACATCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|10844441|gb|BF070981.1|BF070981
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|17022066|gb|BM093100.1|BM093100
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|4284902|gb|AI440839.1|AI440839
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|16348736|gb|BI974331.1|BI974331
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|7147457|gb|AW509379.1|AW509379
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAATGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|21889162|gb|BQ742375.1|BQ742375
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|14011744|gb|BG726666.1|BG726666
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|151411660|gb|EV281471.1|EV281471
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|31455949|gb|CD397977.1|CD397977
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|120493796|gb|EH221963.1|EH221963
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|4289414|gb|AI441472.1|AI441472
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|7924051|gb|AW830059.1|AW830059
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|7041796|gb|AW471690.1|AW471690
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCATGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|6072231|gb|AW101618.1|AW101618
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|9901209|gb|BE610177.1|BE610177
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|6072802|gb|AW102189.1|AW102189
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|17963317|gb|BM270076.1|BM270076
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|8283614|gb|BE021173.1|BE021173
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|254317611|gb|GR826595.1|GR826595
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|209725823|gb|BW659939.1|BW659939
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|7589990|gb|AW705753.1|AW705753
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|15815421|gb|BI787696.1|BI787696
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|208262751|gb|GE058895.1|GE058895
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTAGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|151412448|gb|EV282260.1|EV282260
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|5126292|gb|AI748028.1|AI748028
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|18039491|gb|BM307785.1|BM307785
EST:     GCACTGATAGGAGAATGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|209725822|gb|BW659938.1|BW659938
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|26268599|gb|CA819662.1|CA819662
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|7924027|gb|AW830089.1|AW830089
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|10847019|gb|BF069727.1|BF069727
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|10709737|gb|BF009461.1|BF009461
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|31463666|gb|CD405694.1|CD405694
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCTAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|208144416|gb|GD942167.1|GD942167
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|22524850|gb|BU083661.1|BU083661
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|254341336|gb|GR855064.1|GR855064
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|19346125|gb|BM891005.1|BM891005
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|11688828|gb|BF596504.1|BF596504
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|4313736|gb|AI460855.1|AI460855
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|31457848|gb|CD399876.1|CD399876
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|7692283|gb|AW760393.1|AW760393
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCANGCGCANG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTTCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|6847660|gb|AW349950.1|AW349950
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|298175442|gb|HO015075.1|HO015075
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|207842895|gb|GD813725.1|GD813725
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|4285790|gb|AI440954.1|AI440954
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|6072739|gb|AW102126.1|AW102126
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|8286015|gb|BE023503.1|BE023503
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCC-ACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|12496408|gb|BG047049.1|BG047049
EST:     GCACTGATAGGAGAAAGCGTGAGCCTACACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|23053016|gb|BU577507.1|BU577507
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|31462421|gb|CD404449.1|CD404449
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|120532260|gb|EH260393.1|EH260393
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|208062432|gb|GD858088.1|GD858088
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCC-ACGTCCTGCTGG
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGG
EST: gi|14125784|gb|BG790222.1|BG790222
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|31473183|gb|CD415211.1|CD415211
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|7478654|gb|AW666351.1|AW666351
EST:     GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
EST: gi|23063920|gb|BU578694.1|BU578694
EST:     GCACTGATAGGAGAAATTTTGAGCCTCCACAGCGATTCATCAGGCGCAGG                         GATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA
genomic: GCACTGATAGGAGAAAGCGTGAGCCTCCACAGCGATTCATCAGGCGCAGGgtaaatttat ... tctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaaattgttttatggtaacactcttgtttgatgagtttattgatctctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGAGTAGGAGCTCCTGCCCGAGCTTAAAAGAAAATTCCAAGTTTTTGGGGCT
                                           tctctttgcc  CT-rich tract
                                   tttattgat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gagattgctatattttgtgtggatagactctgattatctgcatataaaattgttttatggtaacactcttgtttgatgagtttattgatctctttgccagGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCCCCACGTCCTGCTGGAGTAGGAGCTCCTGCCCGAGCTTAAAAGAAAATTCCAAGTTTTTGGGGCT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAA
- - -tgctata
- - - - - - - -tgtgtgg
- - - - - - - - - - - - -gactctg
- - - - - - - - - - - - - - - - - - - tgcatat