Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttcttatttcactttcttcaaccttccttttttttttatttttatgcggcaattcaattaaagattttgagatttgtgaaaaaaattaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTCTACGAAC

Basic information

species Glycine max
transcript GLYMA04G39940.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA04G39940.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os01g60790.1 (Oryza sativa), 3'ss of exon 2
---gttcttatttcactttcttcaaccttccttttttttttatttt-tatgcggcaattcaat-taaagattttgagatttgtgaaaaaaattaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTCTACGAAC
      |  |    |    |||   || ||  |  ||           |  |      ||  | |   ||||| |  || | ||       |     |||||||||||| ||||||||||||| |||||||||||| || || ||||| ||  |||| || || |||||||| || ||  ||||  
gtaaggcgaagcgaatccccttttgccctctctcgttgcgcgcgaggcacccactggatctctgtgttgatttgggaatctttgctttgggtgcgggacagGACAAGGCGATCAAGAGGTTTCAGGTGAGGAACATCGTGGAGCAGGCCGCCATCAGGGACGTCCAGGAGGCGTGCGTGCACGATG

upper sequence: GLYMA04G39940.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os05g39960.2 (Oryza sativa), 3'ss of exon 2
--------------gttcttatttcactttctt--caaccttccttttttttttatttttatgcggcaatt-caattaaagatt----------ttgagatttgtgaaaaaaattaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTCTACGAAC
               ||||  |     ||| ||   | | |||    | || ||| | ||| |||  |  | |  ||   | ||          |||    ||| |        |  |  ||||||||||| ||||||||||| | |||||||||||| || || ||||| ||  |||| ||||| |||||||| || ||| | ||  
gttcgcggattcagattctcttgcagatttgttattatcattcagcgtgttattactgttacgcgaaatctgcggtttcggcttggctgattcgttggttcttgggtcgtcgccttgtcgcaggacaagGCCATCAAGAGGTTCCAGGTGAGGAACATCGTCGAGCAGGCGGCCATCAGGGATGTCCAGGAGGCGTGCGTCCATGACG

upper sequence: GLYMA04G39940.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM5G899149_T01 (Zea mays), 3'ss of exon 2
-------gttcttatttcactttctt--caaccttccttttttttttatttttatgcggcaattcaattaaagattttgagatttgtgaaaaaaattaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTCTACGAAC
          | | ||| |||| | |  |||| ||     ||  |||   | |   | |    |    || |   | |  ||| | ||        || |  ||||| |||||||||||| ||||  ||||||||||||||||||| |||||||| || ||||||||||||||||| |||||  | ||  
tgtgctcagacatgtttgacttgcattgcaacattagaacttaattttgctctgaactgtgtatgttgtagaagatatatgatgtttgctg-----tacttgcagGATAAGGCTATCAAGCGGTTCTTGGTGAGGAACATTGTTGAGCAGGCTGCCGTGAGAGATGTGCAGGAGGCCTGTGTACATGATG

upper sequence: GLYMA04G39940.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G129015_T02 (Zea mays), 3'ss of exon 2
gttcttatttcactttcttcaaccttccttttttt---tttatttttatgcggcaatt-caattaaagattt-tgagatttgtgaaaaaaattaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTCTACGAAC
||||||   | | |||   |  | || |  | |||    | | || | ||  | || |    |  || || | |||  || |    |    ||| |  ||||| |||||||||||| ||||  ||||||||||||||||||| |||||||| || || || ||||||||||| |||||  | ||  
gttcttggat-attttgacctgcgttgcaatatttgggctcaattatctgtcgaaactgttgtggaaaatgtatgacgttggcactattttttactcgcagGATAAGGCTATCAAGCGGTTCTTGGTGAGGAACATTGTTGAGCAGGCTGCTGTGAGGGACGTGCAGGAGGCCTGTGTGCATGATG

upper sequence: GLYMA04G39940.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM5G827266_T02 (Zea mays), 3'ss of exon 2
gttcttatttcactttcttcaaccttccttttttttttatttttatgcggcaattcaattaaagattttgagatttgtgaaaaaaattaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTCTACGAAC
     |       |  || ||   |  | ||| ||||| | || ||    |  |    |   ||   ||||  ||  ||        |  | |||||||||||| ||||||||||||| |||||||||||| || |||||||| ||  |||| || || ||||| || || ||||| ||  
----gtgaggagatgcctccacagtcgcctttctttttctcttcatttacccgtgtggt-ggagtccttgatcttgatg-------ctcgttacagGACAAGGCGATCAAGAGGTTTCAGGTGAGGAACATCGTGGAACAGGCGGCCATCAGGGACGTCCAGGAAGCATGCGTCTATGATG

upper sequence: GLYMA04G39940.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM5G827266_T03 (Zea mays), 3'ss of exon 2
gttcttatttcactttcttcaaccttccttttttttttatttttatgcggcaattcaattaaagattttgagatttgtgaaaaaaattaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTCTACGAAC-----
     |       |  || ||   |  | ||| ||||| | || ||    |  |    |   ||   ||||  ||  ||        |  | |||||||||||| ||||||||||||| |||||||||||| || |||||||| ||  |||| || || ||||| || || ||||| ||       
----gtgaggagatgcctccacagtcgcctttctttttctcttcatttacccgtgtggt-ggagtccttgatcttgatg-------ctcgttacagGACAAGGCGATCAAGAGGTTTCAGGTGAGGAACATCGTGGAACAGGCGGCCATCAGGGACGTCCAGGAAGCATGCGTCTATGATGGTAAA

upper sequence: GLYMA04G39940.1 (Glycine max), 3'ss of exon 2
lower sequence: AT2G40510.1 (Arabidopsis thaliana), 3'ss of exon 2
------gttcttatttcactttcttcaaccttccttttttttttatttttatgcggcaattcaattaaagattttgagatttgtgaaaaaaattaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTCTACGAAC
        | | |  |    ||||  | |  ||  | |    | ||| ||||| |  | ||  |||  |  || ||    || |  || || ||    | |||||||||| || ||||||||  | |||||||||||||| || ||||||||  | |||||||| ||||| ||| | ||||| ||  
gtactctctttcaccttctcttctcaatcaatcaatctccagtaattcttatgtg-tattttgatttgatcttgtggtggttctataataatttgg-gatagGACAAGGCCATTAAGAGGTTCATTGTGAGGAACATTGTGGAGCAGGCTGCTATTAGAGATGTTCAGGAAGCTAGCGTCTATGAGG

upper sequence: GLYMA04G39940.1 (Glycine max), 3'ss of exon 2
lower sequence: AT2G40590.1 (Arabidopsis thaliana), 3'ss of exon 2
-------gttcttatttcactttcttcaaccttccttttttttttatttttatgcggcaattcaattaaagattttgagatttgtgaaaaaaattaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTCTACGAAC
        ||| |  ||| |||     | |  ||  | |    | | |  |||| || | ||  ||||  ||| ||| | |  || | | |||||    | |||||||||| || ||||||||  | |||||||||||||| || ||||||||  | |||||||| ||||| ||| | ||||| ||  
gtactctcttcctccttctcttctccaatcaatcaatctccagtaactcctatgtgg-attttgatta--gatcttgtggtg-gtaatataaatttg-gatagGACAAGGCCATTAAGAGGTTCATTGTGAGGAACATTGTGGAGCAGGCTGCTATTAGAGATGTTCAGGAAGCTAGCGTCTATGAGG

upper sequence: GLYMA04G39940.1 (Glycine max), 3'ss of exon 2
lower sequence: AT3G56340.1 (Arabidopsis thaliana), 3'ss of exon 2
gttcttatttcactttcttcaaccttccttttttttttatttttatgcggcaattcaattaaagattttgagatttg---tgaaaaaaattaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTCTACGAAC
        |||| | || |  |   || |||     || |   | ||    ||    ||| || || |   ||| ||   |        ||  | | |||||||||| || ||||| ||| | || |||||||||||||| ||||||||  | |||||||| || || ||| | ||||||||| 
-------gttcattctcctacataatcatttcccggttctagatttgtcttaa---gattgaaaatgtatcgatctggttttggctctcttgttgatagGACAAGGCGATTAAGAGATTTATCGTAAGGAACATTGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG

upper sequence: GLYMA04G39940.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv13s0067g02700.t01 (Vitis vinifera), 3'ss of exon 3
gttcttatttcactttcttcaaccttccttttttttttatttttatgcggcaattcaattaaagattttgagatttgtgaaaaaaattaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTCTACGAAC
  |||   | || ||   |   |     |  |  |||| | |  | ||  || |  | || ||    |||     |||    ||   |   | ||||||||||| |||||||||||| ||||||||||||| || || || |||||||| || ||||| |||||||| || ||||| ||  
-gtctcgctccatttgtatt--ctgatttagtggttttgtatcaaagcatcagt--agttgaa----ttggtgcgtgtttggaattgtgtgatcagGACAAGGCAATCAAGAGGTTTTTGGTGAGGAACATCGTGGAGCAAGCTGCAGTGAGGGATGTTCAGGAGGCCTGCGTCTATGACA

upper sequence: GLYMA04G39940.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv06s0004g07940.t01 (Vitis vinifera), 3'ss of exon 2
---------gttcttatttcactttcttcaaccttccttttttttttatttttatgcggcaattcaattaaagattttgagatttgtgaaaaaaattaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTCTACGAAC
         ||| | |   ||||       |   |   |||| |||| |  ||    || ||  |  |||||||  |||   |   ||     | |   | | ||||||| ||||| |||||||||||||||||||||||||| || || ||||| ||  | |||||||| || |||||||| || ||  
ttccaatgtgttgtcaac-cactaaaaatgaaacttagttttgttttgtaattg-atggaaaccc--ttaaagaggttgtc-tccttgttgtgattatgttaaagGACAAAGCTATTAAGAGGTTTCTGGTGAGGAACATTGTGGAGCAAGCTGCTGTTCGTGATGTGCAAGAAGCTTGTGTTTATGATA

upper sequence: GLYMA04G39940.1 (Glycine max), 3'ss of exon 2
lower sequence: PP1S169_19V6.1 (Physcomitrella patens), 3'ss of exon 2
----------------------------------------------------------------gttcttatttcactttcttcaaccttccttttttttttatttttatgcggcaatt--caattaaagattttgag--atttgtgaaaaaaattaa---taacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTCTACGAAC
                                                                |||   | |    | || | |||  | || |     | |  | | |||     ||  ||  | | ||||| ||     |  | |      || |   |  |||||||||||  | ||| ||||| ||||| | ||||||||||| |||||||| ||| | |||||||| || ||||| || |||||  
gttgccgtgctcctaaacagtttttagacttccgttgcaataatgtgtcgtaattggctgatcagttaagaatcaggtgtcgtaaac--tactgtcaaactcaagtatgtgccatttttatcacattaggatttagaatcgctgatcattggtgttgaattttgcagGACAAGGCCGTGAAGCGGTTTTTGGTGCGTAACATTGTTGAGCAGGCTGCTGTCCGTGATGTGCAAGAAGCTTGCGTATACGATG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|13481601|gb|BG510944.1|BG510944
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|58019087|gb|CX705829.1|CX705829
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|254317610|gb|GR826594.1|GR826594
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|8285663|gb|BE023222.1|BE023222
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|58022257|gb|CX708998.1|CX708998
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|7686487|gb|AW757135.1|AW757135
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|31470437|gb|CD412465.1|CD412465
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|4307186|gb|AI444011.1|AI444011
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|38191905|gb|CF921111.1|CF921111
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|13791368|gb|BG653959.1|BG653959
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|7041609|gb|AW471503.1|AW471503
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|9900681|gb|BE609649.1|BE609649
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|16348589|gb|BI974184.1|BI974184
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGGGAGGAACATTGGTGAACAGTTTGTA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|31472287|gb|CD414315.1|CD414315
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|6667405|gb|AW278856.1|AW278856
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|21256861|gb|BQ453749.1|BQ453749
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|213594186|gb|DB963783.1|DB963783
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|31305403|gb|CD390606.1|CD390606
EST:     GCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|7145993|gb|AW507915.1|AW507915
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|193344833|gb|FK310409.1|FK310409
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|10844441|gb|BF070981.1|BF070981
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|17022066|gb|BM093100.1|BM093100
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|4284902|gb|AI440839.1|AI440839
EST:     TGCTGCCCTAAG                         GACAAGGCTATCAAGAGG-TTCNTGGTGA-GNACANNTGTTGAACAGGCTG
genomic: TGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTC-TGGTGAGGAACA-TTGTTGAACAGGCTG
EST: gi|16348736|gb|BI974331.1|BI974331
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|7147457|gb|AW509379.1|AW509379
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|21889162|gb|BQ742375.1|BQ742375
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|14011744|gb|BG726666.1|BG726666
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|151411660|gb|EV281471.1|EV281471
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|120493796|gb|EH221963.1|EH221963
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|208190571|gb|GD992731.1|GD992731
EST:     CTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: CTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|4289414|gb|AI441472.1|AI441472
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|7924051|gb|AW830059.1|AW830059
EST:     CACGTC-AGTTTCATTCGATGCTCCAACT-CGGCACAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: CACGTCAAG-TTCATTCGATGCTCCAACTGCGGCA-AATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|7041796|gb|AW471690.1|AW471690
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|6072231|gb|AW101618.1|AW101618
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|9901209|gb|BE610177.1|BE610177
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|6072802|gb|AW102189.1|AW102189
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|17963317|gb|BM270076.1|BM270076
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|8283614|gb|BE021173.1|BE021173
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|254317611|gb|GR826595.1|GR826595
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|193433735|gb|FK399705.1|FK399705
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|7589990|gb|AW705753.1|AW705753
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|15815421|gb|BI787696.1|BI787696
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|151412448|gb|EV282260.1|EV282260
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|5126292|gb|AI748028.1|AI748028
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|209725822|gb|BW659938.1|BW659938
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|7924027|gb|AW830089.1|AW830089
EST:     CCACGTCAAGTTCATTCGATGCTCCAACT-CGGCCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: CCACGTCAAGTTCATTCGATGCTCCAACTGCGG-CAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|10847019|gb|BF069727.1|BF069727
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|10709737|gb|BF009461.1|BF009461
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAAAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|31463666|gb|CD405694.1|CD405694
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|22524850|gb|BU083661.1|BU083661
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|254341336|gb|GR855064.1|GR855064
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|19346125|gb|BM891005.1|BM891005
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATTCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|11688828|gb|BF596504.1|BF596504
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|4313736|gb|AI460855.1|AI460855
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|31457848|gb|CD399876.1|CD399876
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|6847660|gb|AW349950.1|AW349950
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCTTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|298175442|gb|HO015075.1|HO015075
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|4285790|gb|AI440954.1|AI440954
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|6072739|gb|AW102126.1|AW102126
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|8286015|gb|BE023503.1|BE023503
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|12496408|gb|BG047049.1|BG047049
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|23053016|gb|BU577507.1|BU577507
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|208324970|gb|GE124868.1|GE124868
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|31462421|gb|CD404449.1|CD404449
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|120532260|gb|EH260393.1|EH260393
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|14125784|gb|BG790222.1|BG790222
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|31473183|gb|CD415211.1|CD415211
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|7478654|gb|AW666351.1|AW666351
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|23063920|gb|BU578694.1|BU578694
EST:     GCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|31459779|gb|CD401807.1|CD401807
EST:     GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: GCCACGTCAAGTTCATTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
EST: gi|208186332|gb|GD984637.1|GD984637
EST:     TTCGATGCTCCAACTGCGGCAAATGCTGTCCTAAG                         GACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA
genomic: TTCGATGCTCCAACTGCGGCAAATGCTGCCCTAAGgttcttattt ... ttaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttatgcggcaattcaattaaagattttgagatttgtgaaaaaaattaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTCTACGAAC
                                           aattaat  putative branch site (score: 3)
               aattaaagattttgag  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gttcttatttcactttcttcaaccttccttttttttttatttttatgcggcaattcaattaaagattttgagatttgtgaaaaaaattaataacagGACAAGGCTATCAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTCTACGAAC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGATG