1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtatggctgattctgctgtttgatgttttcttcttcttgttgtgattcgtgtgttgtctgattcgccttctgatgttttgaaattgggaatgctttttttttcttgttggttttggtttttcagGTTTTGGAGCAAAGACAAAAGATGGGTGAGGGAGAACGTTTCCAGCTTGGGACTGTGGGTGCGTTGACTCTTTCTGTGGTCTCATCTGTGTCCATTGTGA
species | Glycine max |
transcript | GLYMA04G39920.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GTTCCTCTGTCGGCGTCTGGGTGGGTAAAAGTTGTTGTTTTGTCTTCTGG GTTTTGGAGCAA-GACAAAAGATGGGTGAGGGAGAACGTTTCCAGCTTGGGEST: gi|8282895|gb|BE020456.1|BE020456
genomic: GTTCCTCTGTCGGCGTCTGGGTGGGTAAAAGTTGTTGTTTTGTCTTCTGGgtatggctga ... ggtttttcagGTTTTGGAGCAAAGACAAAAGATGGGTGAGGGAGAACGTTTCCAGCTTGGG
EST: GTTCCTCTGTCGGCGTCTGGGTGGGTAAAAGTTGTTGTTTTGTCTTCTGG GTTTTGGAGCAAAGACAAAAGATGGGTGAGGGAGAACGTTTCCAGCTTGGGEST: gi|213597097|gb|DB968178.1|DB968178
genomic: GTTCCTCTGTCGGCGTCTGGGTGGGTAAAAGTTGTTGTTTTGTCTTCTGGgtatggctga ... ggtttttcagGTTTTGGAGCAAAGACAAAAGATGGGTGAGGGAGAACGTTTCCAGCTTGGG
EST: GTTCCTCTGTCGGCGTCTGGGTGGGTAAAAGTTGTTGTTTTGTCTTCTGG GTTTTGGAGCAAAGACAAAAGATGGGTGAGGGAGAACGTTTCCAGCTTGGG
genomic: GTTCCTCTGTCGGCGTCTGGGTGGGTAAAAGTTGTTGTTTTGTCTTCTGGgtatggctga ... ggtttttcagGTTTTGGAGCAAAGACAAAAGATGGGTGAGGGAGAACGTTTCCAGCTTGGG
ctgatgttttgaaattgggaatgctttttttttcttgttggttttggtttttcagGTTTTGGAGCAAAGACAAAAGATGGGTGAGGGAGAACGTTTCCAGCTTGGGACTGTGGGTGCGTTGACTCTTTCTGTGGTCTCATCTGTGTCCATTGTGA
ttctgat putative branch site (score: 3)
tttttc putative PPT
tttttttttcttgtt TA-rich tract