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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCAGATCCTGCACCTGTCTTCCATTTTCTCAACTGATTCTTTCAGGATTGGATCCTGACTGTCTTGATATTTGTTCAAGGCTACTACGCTTAAATCCAGgttttgcacattttctattttacatttttaacatatctgctcaatttcatgtggaaatctaattatttataaagtttttgcaccctatcacag

Basic information

species Glycine max
transcript GLYMA04G39350.2
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15000699|gb|BI321513.1|BI321513
EST:     GGATCCTGACTGTCTTGATATTTGTTCAAGGCTACTACGCTTAAATCCAG                         TGGAGCGCCTCTCCTTTGATGAATTTTATTGGCATAGCTTTCTACAAAGAA
genomic: GGATCCTGACTGTCTTGATATTTGTTCAAGGCTACTACGCTTAAATCCAGgttttgcaca ... cctatcacagTGGAGCGCCTCTCCTTTGATGAATTTTATTGGCATAGCTTTCTACAAAGAA
EST: gi|151407742|gb|EV277557.1|EV277557
EST:     GGATCCTGACTGTCTTGATATTTGTTCAAGGCTACTACGCTTAAATCCAG                         TGGAGCGCCTCTCCTTTGATGAATTTTATTGGCATAGCTTTCTACAAAGAA
genomic: GGATCCTGACTGTCTTGATATTTGTTCAAGGCTACTACGCTTAAATCCAGgttttgcaca ... cctatcacagTGGAGCGCCTCTCCTTTGATGAATTTTATTGGCATAGCTTTCTACAAAGAA
EST: gi|23732803|gb|BU764575.1|BU764575
EST:     GGATCCTGACTGTCTTGATATTTGTTCAAGGCTACTACGCTTAAATCCAG                         TGGAGCGCCTCTCCTTTGATGAATTTTATTGGCATAGCTTTCTACAAAGAA
genomic: GGATCCTGACTGTCTTGATATTTGTTCAAGGCTACTACGCTTAAATCCAGgttttgcaca ... cctatcacagTGGAGCGCCTCTCCTTTGATGAATTTTATTGGCATAGCTTTCTACAAAGAA
EST: gi|18709598|gb|BM522446.1|BM522446
EST:     GGATCCTGACTGTCTTGATATTTGTTCAAGGCTACTACGCTTAAATCCAG                         TGGAGCGCCTCTCCTTTGATGAATTTTATTGGCATAGCTTTCTACAAAGAA
genomic: GGATCCTGACTGTCTTGATATTTGTTCAAGGCTACTACGCTTAAATCCAGgttttgcaca ... cctatcacagTGGAGCGCCTCTCCTTTGATGAATTTTATTGGCATAGCTTTCTACAAAGAA