1 5' 3' | 2 5' 3' |
gtataatttgaatttgttgtgtatttcatcaacagttccattctcagttgatttgttcctatgtttattatagtctattaatgaacttgcttttgctgtgtccacagGAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTTGTCAAATTTATGTCCACATGGTTTGCAGCACTACCTCAAGTGTTTCTTT
species | Glycine max |
transcript | GLYMA0041S00300.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAG GAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTTEST: gi|120529649|gb|EH257783.1|EH257783
genomic: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAGgtataatttg ... gtgtccacagGAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTT
EST: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAG GAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTTEST: gi|192308860|gb|FK002084.1|FK002084
genomic: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAGgtataatttg ... gtgtccacagGAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTT
EST: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAG GAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTTEST: gi|120529695|gb|EH257829.1|EH257829
genomic: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAGgtataatttg ... gtgtccacagGAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTT
EST: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAG GAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTTEST: gi|58022195|gb|CX708936.1|CX708936
genomic: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAGgtataatttg ... gtgtccacagGAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTT
EST: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAG GAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTTEST: gi|192308859|gb|FK002083.1|FK002083
genomic: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAGgtataatttg ... gtgtccacagGAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTT
EST: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAG GAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTTEST: gi|51337361|gb|CO981227.1|CO981227
genomic: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAGgtataatttg ... gtgtccacagGAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTT
EST: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAG GAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTTEST: gi|15204659|gb|BI427427.1|BI427427
genomic: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAGgtataatttg ... gtgtccacagGAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTT
EST: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAG GAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTTEST: gi|192304316|gb|FG993572.1|FG993572
genomic: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAGgtataatttg ... gtgtccacagGAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTT
EST: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAG GAAAAGGATTTGAAACGGCATCTTCTGGGCGTGTATTGCCTTTTTGTGTTT
genomic: CGGCTGATTTCTTGAAGGAGATATCACAAGAATTGTTTCATAAATCTGAGgtataatttg ... gtgtccacagGAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTT
ttgttcctatgtttattatagtctattaatgaacttgcttttgctgtgtccacagGAAAAGGATTTGAAACGGCATCTTCTGGGCATGTATTGCCTTTTTGTGTTTGTCAAATTTATGTCCACATGGTTTGCAGCACTACCTCAAGTGTTTCTTT
tattaat putative branch site (score: 2)
tatgtttattatagtc TA-rich tract