Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCAACTTATCAAAGAGATATTTTGCAGTTTCTGTCCATGAAACTTGCCACAGTGAACCCAGAACTGAACTTTGATGTAGACAGGATCCTATCCAAGGATgtaagtgaaggtcttaatcttctaggtccatttactattttttaacacattaaactaagataatttcatttctcttcaattagattctccaatcacgcat...

Basic information

species Glycine max
transcript GLYMA0041S00210.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA0041S00210.1 (Glycine max), 5'ss of exon 5
lower sequence: Vv18s0001g08600.t01 (Vitis vinifera), 5'ss of exon 5
TCAACTTATCAAAGAGATATTTTGCAGTTTCTGTCCATGAAACTTGCCACAGTGAACCCAGAACTGAACTTTGATGTAGACAGGATCCTATCCAAGGATgtaagtgaaggtcttaatcttctaggtccatttactattttttaacacattaaactaagataatttcatttctcttcaattagattctccaatcacgcat---------------------
                           |||||||| |||||||||||||| || || |||||||||||| ||||| ||||  |  | ||||| || ||||||||| || ||| |  | | ||||    | |   |     | ||   || | | ||  | | |    |||    |  | |  || |    || |  |||                     
---------------------------TTTCTGTCAATGAAACTTGCCACTGTCAATCCAGAACTGAACATTGATATAGAACGACTTCTATCGAAAGATgtaagttaatgtcatgttttgctagaataaat--gtggaaatgaatcaatcacattatcacattccttttttcggtttagtgaatgccatgat-attcatgttagttttcctcttgcatag