Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|15697386|gb|BI721691.1|BI721691EST: TGATGGATGGCCAGGAGTTCAACGGCGCCAAGGCCTACAAGGACTCCAAG GTGGCGTGCATGATGACCGTGCGCCAGATGCACCAGCGCTTCCACGACGCC
genomic: TGATGGATGGCCAGGAGTTCAACGGCGCCAAGGCCTACAAGGACTCCAAGgtgagcgggg ... gcaattgtagGTGGCGTGCATGATGACCGTGCGCCAGATGCACCAGCGCTTCCACGACGCC
EST:
gi|10771046|gb|AV621869.1|AV621869EST: TGATGGATGGCCAGGAGTTCAACGGCGCCAAGGCCTACAAGGACTCCAAG GTGGCGTGCATGATGACCGTGCGCCAGATGCACCAGCGCTTCCACGACGCC
genomic: TGATGGATGGCCAGGAGTTCAACGGCGCCAAGGCCTACAAGGACTCCAAGgtgagcgggg ... gcaattgtagGTGGCGTGCATGATGACCGTGCGCCAGATGCACCAGCGCTTCCACGACGCC
EST:
gi|16437339|gb|BM002559.1|BM002559EST: TGATGGATGGCCAGGAGTTCAACGGCGCCAAGGCCTACAAGGACTCCAAG GTGGCGTGCATGATGACCGTGCGCCAGATGCACCAGCGCCTTC-ACGACGC
genomic: TGATGGATGGCCAGGAGTTCAACGGCGCCAAGGCCTACAAGGACTCCAAGgtgagcgggg ... gcaattgtagGTGGCGTGCATGATGACCGTGCGCCAGATGCACCAGCGC-TTCCACGACGC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CCTGGGCGACCTGTCGGGCCTCGCCGCCGGCGTGCCCGCCGCCAACCCCATGATGGATGGCCAGGAGTTCAACGGCGCCAAGGCCTACAAGGACTCCAAGgtgagcggggcaggcttgcaaaaaggtggttaacatcggttgacgttggctatgggctcggaggctcgtgggcgcgtgctggggctcggggactcctgcctggttctgtcacgtttgttccctctttgaccacgtgcacttggttctgactctcgccccttcttctctccctctctcgcaattgtag
- - - - - - - - - - - - - - - - - - - - - - - - - GATGGA