1 5' 3' | 2 5' 3' |
gtgagcggggcaggcttgcaaaaaggtggttaacatcggttgacgttggctatgggctcggaggctcgtgggcgcgtgctggggctcggggactcctgcctggttctgtcacgtttgttccctctttgaccacgtgcacttggttctgactctcgccccttcttctctccctctctcgcaattgtagGTGGCGTGCATGATGACCGTGCGCCAGATGCACCAGCGCTTCCACGACGCCACCGGCATCACCTTCGCCTCGCTGTACCCCGGCTGCATTGCCGAGACCG
species | Chlamydomonas reinhardtii |
transcript | EDP09202 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TGATGGATGGCCAGGAGTTCAACGGCGCCAAGGCCTACAAGGACTCCAAG GTGGCGTGCATGATGACCGTGCGCCAGATGCACCAGCGCTTCCACGACGCCEST: gi|10771046|gb|AV621869.1|AV621869
genomic: TGATGGATGGCCAGGAGTTCAACGGCGCCAAGGCCTACAAGGACTCCAAGgtgagcgggg ... gcaattgtagGTGGCGTGCATGATGACCGTGCGCCAGATGCACCAGCGCTTCCACGACGCC
EST: TGATGGATGGCCAGGAGTTCAACGGCGCCAAGGCCTACAAGGACTCCAAG GTGGCGTGCATGATGACCGTGCGCCAGATGCACCAGCGCTTCCACGACGCCEST: gi|16437339|gb|BM002559.1|BM002559
genomic: TGATGGATGGCCAGGAGTTCAACGGCGCCAAGGCCTACAAGGACTCCAAGgtgagcgggg ... gcaattgtagGTGGCGTGCATGATGACCGTGCGCCAGATGCACCAGCGCTTCCACGACGCC
EST: TGATGGATGGCCAGGAGTTCAACGGCGCCAAGGCCTACAAGGACTCCAAG GTGGCGTGCATGATGACCGTGCGCCAGATGCACCAGCGCCTTC-ACGACGC
genomic: TGATGGATGGCCAGGAGTTCAACGGCGCCAAGGCCTACAAGGACTCCAAGgtgagcgggg ... gcaattgtagGTGGCGTGCATGATGACCGTGCGCCAGATGCACCAGCGC-TTCCACGACGC
cgtgcacttggttctgactctcgccccttcttctctccctctctcgcaattgtagGTGGCGTGCATGATGACCGTGCGCCAGATGCACCAGCGCTTCCACGACGCCACCGGCATCACCTTCGCCTCGCTGTACCCCGGCTGCATTGCCGAGACCG
ttctgac putative branch site (score: 2)
ttctgactctcgcccc CT-rich tract
aattgta TA-rich tract