1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ACATTAACTACGACTTCACGCCGCAGTGCGCGCGCACCGACAGCTTCACCAACGCCTACCAGACCGACACCGTCTCACAGCGTGCTAGCAACTACATCGAgtgagtggcgcagactggctctggcggggatgcgggattgcgcattgtgtttggtaactccatcagtacgcactggctcctgcggggatgtgggattgcg...
species | Chlamydomonas reinhardtii |
transcript | EDP06453 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AACGCCTACCAGACCGACACCGTCTCACAGCGTGCTAGCAACTACATCGA TGACGCCGTGAGCAAGGGCAAGCCCTTCTACCTGCAGGTCAACCCCGCCGCEST: gi|23361242|gb|BU649062.1|BU649062
genomic: AACGCCTACCAGACCGACACCGTCTCACAGCGTGCTAGCAACTACATCGAgtgagtggcg ... tgctccgcagTGACGCCGTGAGCAAGGGCAAGCCCTTCTACCTGCAGGTCAACCCCGCCGC
EST: AACGCCTACCAGACCGACACCGTCTCACAGCGTGCTAGCAACTACATCGA TGACGCCGTGAGCAAGGGCAAGCCCTTCTACCTGCAGGTCAACCCCGCCGCEST: gi|23367531|gb|BU655349.1|BU655349
genomic: AACGCCTACCAGACCGACACCGTCTCACAGCGTGCTAGCAACTACATCGAgtgagtggcg ... tgctccgcagTGACGCCGTGAGCAAGGGCAAGCCCTTCTACCTGCAGGTCAACCCCGCCGC
EST: AACGCCTACCAGACCGACACCGTCTCACAGCGTGCTAGCAACTACATCGA TGACGCCGTGAGCAAGGGCAAGCCCTTCTACCTGCAGGTCAACCCCGCCGCEST: gi|15694590|gb|BI718895.1|BI718895
genomic: AACGCCTACCAGACCGACACCGTCTCACAGCGTGCTAGCAACTACATCGAgtgagtggcg ... tgctccgcagTGACGCCGTGAGCAAGGGCAAGCCCTTCTACCTGCAGGTCAACCCCGCCGC
EST: AACGCCTACCAGACCGACACCGTCTCACAGCGTGCTAGCAACTACATCGA TGACGCCGTGAGCAAGGGCAAGCCCTTCTACCTGCAGGTCAACCCCGCCGTEST: gi|16435514|gb|BM000734.1|BM000734
genomic: AACGCCTACCAGACCGACACCGTCTCACAGCGTGCTAGCAACTACATCGAgtgagtggcg ... tgctccgcagTGACGCCGTGAGCAAGGGCAAGCCCTTCTACCTGCAGGTCAACCCCGCCGC
EST: AACGCCTACCAGACCGACACCGTTTCACAGCGTGCTAGCAACTACATCGA TGACGCCGTGAGCAAGGGCAAGCCCTTCTACCTGCAGGTCAACCEST: gi|16430804|gb|BI996030.1|BI996030
genomic: AACGCCTACCAGACCGACACCGTCTCACAGCGTGCTAGCAACTACATCGAgtgagtggcg ... tgctccgcagTGACGCCGTGAGCAAGGGCAAGCCCTTCTACCTGCAGGTCAACC
EST: AACGCCTACCAGACCGACACCGTCTCACAGCGTGCTAGCAACTACATCGA TGACGCCGTGAGCAAGGGCAAGCCCTTCTACCTGCAGGTCAACCCCGCCGC
genomic: AACGCCTACCAGACCGACACCGTCTCACAGCGTGCTAGCAACTACATCGAgtgagtggcg ... tgctccgcagTGACGCCGTGAGCAAGGGCAAGCCCTTCTACCTGCAGGTCAACCCCGCCGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACATTAACTACGACTTCACGCCGCAGTGCGCGCGCACCGACAGCTTCACCAACGCCTACCAGACCGACACCGTCTCACAGCGTGCTAGCAACTACATCGAgtgagtggcgcagactggctctggcggggatgcgggattgcgcattgtgtttggtaactccatcagtacgcactggctcctgcggggatgtgggattgcg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tggctct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgcgcat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgtgttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aactcca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tacgcac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgtggga