1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ACCGCCTCCTCTTGCCCAGCAGAGCGAGGATAGCCCCCCGCCTGCCTCTCCCTCGCCGCCGCGGCCTCCAACTGCACCCTTCACCCAGCCCAACTTCCTGgtgaggcaaacactgacccctgcggcgcccagccccttccaggcacccgtgcggtaccctgctttgccctgcgccggtgaccacgcggtgacccctgcta...
species | Chlamydomonas reinhardtii |
transcript | EDP06453 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCTCGCCGCCGCGGCCTCCAACTGCACCCTTCACCCAGCCCAACTTCCTG GTCCTTCTGGTCGATGACCAGGACTACCTACTCAACAGCACCGACCGCAAGEST: gi|6551280|gb|AV397064.1|AV397064
genomic: CCTCGCCGCCGCGGCCTCCAACTGCACCCTTCACCCAGCCCAACTTCCTGgtgaggcaaa ... cgctccgcagGTCCTTCTGGTCGATGACCAGGACTACCTACTCAACAGCACCGACCGCAAG
EST: CCTCGCCGCCGCGGCCTCCAACTGCACCCTTCACCCAGCCCAACTTCCTG GTCCTTCTGGTCGATGACCAGGACTACCTACTCAACAGCACCGACCGCAAGEST: gi|10790814|gb|AV628180.1|AV628180
genomic: CCTCGCCGCCGCGGCCTCCAACTGCACCCTTCACCCAGCCCAACTTCCTGgtgaggcaaa ... cgctccgcagGTCCTTCTGGTCGATGACCAGGACTACCTACTCAACAGCACCGACCGCAAG
EST: CCTCGCCGCCGCGGCCTCCAACTGCACCCTTCACCCAGCCCAACTTCCTG GTCCTTCTGGTCGATGACCAGGACTACCTACTCAACAGCACCGACCGCAAG
genomic: CCTCGCCGCCGCGGCCTCCAACTGCACCCTTCACCCAGCCCAACTTCCTGgtgaggcaaa ... cgctccgcagGTCCTTCTGGTCGATGACCAGGACTACCTACTCAACAGCACCGACCGCAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCGCCTCCTCTTGCCCAGCAGAGCGAGGATAGCCCCCCGCCTGCCTCTCCCTCGCCGCCGCGGCCTCCAACTGCACCCTTCACCCAGCCCAACTTCCTGgtgaggcaaacactgacccctgcggcgcccagccccttccaggcacccgtgcggtaccctgctttgccctgcgccggtgaccacgcggtgacccctgcta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - caaacac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cagcccc