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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gcatggggttcaatggcctgacagtccgcaatgcgcttacgtaggcagcacctcccgcgcggctctgcgtccggtattaatctccctcctctccttgcagGCTGGGAGACTGTTTAGGCCGGAAGGCGGACCTGTGAAACCTTTCATTCCCGTATCCGCGGGGCACAAGCGGCTCTCCATGTGGTCGGTGAACCCGTACG

Basic information

species Chlamydomonas reinhardtii
transcript EDP06449
intron # 6
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cagcacctcccgcgcggctctgcgtccggtattaatctccctcctctccttgcagGCTGGGAGACTGTTTAGGCCGGAAGGCGGACCTGTGAAACCTTTCATTCCCGTATCCGCGGGGCACAAGCGGCTCTCCATGTGGTCGGTGAACCCGTACG
                             tattaat  putative branch site (score: 2)
                             tattaatctccctcct  CT-rich tract
                             tattaatct  TA-rich tract