Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacgctgcaaatggaatccccttccgcttgcgggccccgacacctaagtttgcttccctatccctgatcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCTGGTGTCACGACGAACAACTACGCTCTGGATGAGGTTGTTGCCGCCAAGT

Basic information

species Chlamydomonas reinhardtii
transcript EDP06390
intron # 3
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|34990635|gb|CF564552.1|CF564552
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|161810158|gb|FC099301.1|FC099301
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|23360611|gb|BU648431.1|BU648431
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|7545792|gb|AW676280.1|AW676280
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|6548691|gb|AV394475.1|AV394475
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|10126709|gb|BE725429.1|BE725429
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTTGTTTCCGTCGACCAG                         AACGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|7546147|gb|AW676635.1|AW676635
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|161813151|gb|FC104700.1|FC104700
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|161815516|gb|FC101059.1|FC101059
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|34982340|gb|CF556257.1|CF556257
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|34990636|gb|CF564553.1|CF564553
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|34981411|gb|CF555328.1|CF555328
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|49464531|gb|BP092444.1|BP092444
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|34982117|gb|CF556034.1|CF556034
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|7615650|gb|AW721090.1|AW721090
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|6549385|gb|AV395169.1|AV395169
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|7615408|gb|AW720852.1|AW720852
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|34992258|gb|CF566175.1|CF566175
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTTTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|161794599|gb|FC081981.1|FC081981
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|161813150|gb|FC104699.1|FC104699
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTTGTTTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|161794598|gb|FC081980.1|FC081980
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|6547928|gb|AV393712.1|AV393712
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|34982571|gb|CF556488.1|CF556488
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|161810157|gb|FC099300.1|FC099300
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTGGTTTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAATTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|161806686|gb|FC088154.1|FC088154
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|22065127|gb|BQ816196.1|BQ816196
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|34981650|gb|CF555567.1|CF555567
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|6549491|gb|AV395275.1|AV395275
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|161811348|gb|FC098801.1|FC098801
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAA                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|6548070|gb|AV393854.1|AV393854
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|34989538|gb|CF563455.1|CF563455
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|7546055|gb|AW676543.1|AW676543
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|6550483|gb|AV396267.1|AV396267
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|7546148|gb|AW676636.1|AW676636
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|22076564|gb|BQ825340.1|BQ825340
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|6550059|gb|AV395843.1|AV395843
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|7615407|gb|AW720851.1|AW720851
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|161811375|gb|FC098802.1|FC098802
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|161792829|gb|FC077858.1|FC077858
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|49466646|gb|BP094559.1|BP094559
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|22076563|gb|BQ825339.1|BQ825339
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|34982115|gb|CF556032.1|CF556032
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAA                         AACGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|161802437|gb|FC092976.1|FC092976
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|34982572|gb|CF556489.1|CF556489
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|7615649|gb|AW721089.1|AW721089
EST:     CCGAGTCCTACTGGTTCAATCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|7616055|gb|AW721495.1|AW721495
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|7616056|gb|AW721496.1|AW721496
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|34982570|gb|CF556487.1|CF556487
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|7709605|gb|AW773094.1|AW773094
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|34981410|gb|CF555327.1|CF555327
EST:     GTTCAACCAGGTCGGCAAGGTGGTTTCCGTTAACCAG                         AGCGGAGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: GTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|34990634|gb|CF564551.1|CF564551
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|10126570|gb|BE725274.1|BE725274
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|14230493|gb|BG849309.1|BG849309
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|34982116|gb|CF556033.1|CF556033
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|49458803|gb|BP086716.1|BP086716
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|34992259|gb|CF566176.1|CF566176
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|34989537|gb|CF563454.1|CF563454
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
EST: gi|16073180|gb|BI875176.1|BI875176
EST:     CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAG                         AGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT
genomic: CCGAGTCCTACTGGTTCAACCAGGTCGGCAAGGTCGTCTCCGTCGACCAGgtacgctgca ... tcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tccgcttgcgggccccgacacctaagtttgcttccctatccctgatcattcgcagAGCGGCGTCCGCTACCCCGTCGTTGTCCGTTTCGAGAACCAGAACTACGCTGGTGTCACGACGAACAACTACGCTCTGGATGAGGTTGTTGCCGCCAAGT
                                       ccctgat  putative branch site (score: 4)
                      taagttt  TA-rich tract