Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|8287227|gb|BE024786.1|BE024786EST: ATGGTTGTGTCGGTGCTTCATAACAAACCTGCATCCGTGGAGCAGCACAT GTTGAAGCACCTAGTGGGCAAAGTGAAGCAATCATCAGAGGAGGCGGCCGT
genomic: ATGGTTGTGTCGGTGCTTCATAACAAACCTGCATCCGTGGAGCAGCACATgtgagtctgg ... ccatcaacagGTTGAAGCACCTAGTGGGCAAAGTGAAGCAATCATCAGAGGAGGCGGCCGT
EST:
gi|8287421|gb|BE024980.1|BE024980EST: ATGGTTGTGTCGGTGCTTCATAACAAACCTGCATCCGTGGAGCAGCACAT GTTGAAGCACCTAGTGGGCAAAGTGAAGCAATCATCAGAGGAGGCGGCCGT
genomic: ATGGTTGTGTCGGTGCTTCATAACAAACCTGCATCCGTGGAGCAGCACATgtgagtctgg ... ccatcaacagGTTGAAGCACCTAGTGGGCAAAGTGAAGCAATCATCAGAGGAGGCGGCCGT
EST:
gi|10779183|gb|AV635863.1|AV635863EST: ATGGTTGTGTCGGTGCTTCATAACAAACCTGCATCCGTGGAGCAGCACAT GTTGAAGCACCTAGTGGGCAAAGTGAAGCAATCATCAGAGGAGGCGGCCGT
genomic: ATGGTTGTGTCGGTGCTTCATAACAAACCTGCATCCGTGGAGCAGCACATgtgagtctgg ... ccatcaacagGTTGAAGCACCTAGTGGGCAAAGTGAAGCAATCATCAGAGGAGGCGGCCGT
EST:
gi|10770050|gb|AV620875.1|AV620875EST: ATGGTTGTGTCGGTGCTTCATAACAAACCTGCATCCGTGGAGCAGCACAT GTTGAAGCACCTAGTGGGCAAAGTGAAGCAATCATCAGAGGAGGCGGCCGT
genomic: ATGGTTGTGTCGGTGCTTCATAACAAACCTGCATCCGTGGAGCAGCACATgtgagtctgg ... ccatcaacagGTTGAAGCACCTAGTGGGCAAAGTGAAGCAATCATCAGAGGAGGCGGCCGT
EST:
gi|10794318|gb|AV631684.1|AV631684EST: ATGGTTGTGTCGGTGCTTCATAACAAACCTGCATCCGTGGAGCAGCACAT GTTGAAGCACCTAGTGGGCAAAGTGAAGCAATCATCAGAGGAGGCGGCCGT
genomic: ATGGTTGTGTCGGTGCTTCATAACAAACCTGCATCCGTGGAGCAGCACATgtgagtctgg ... ccatcaacagGTTGAAGCACCTAGTGGGCAAAGTGAAGCAATCATCAGAGGAGGCGGCCGT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ATGTGGAGAATTATCTCCGGACAACGAATGTTGACAAAGTCGTCAAGGAGATGGTTGTGTCGGTGCTTCATAACAAACCTGCATCCGTGGAGCAGCACATgtgagtctggaccaaacgctgggcgactgcgacatgccacacctttcgtgcatgctttcccctacctacacccctggcattgctgcacctaacccctgccaactcccatcaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG