1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtatggagcctgtgatagtatcttaactcgggtcctggcgagaggctgccctcaaacgttcactcggttgtgtccttgcaccaccactcttagcatggtcctccgcctgctcctgctcgtggactccatcgcctgcgccgtcgcgctcctcctcctcgccctcccggtgtgctgatacgccgccttctcaaacaaacagGGCTGGGCCCCCGCGGTGCGCTCGGAACAGCACTCGTCCGCGTCCATTCGAACACGGCCACGCTACCGCGCGTCTG
species | Chlamydomonas reinhardtii |
transcript | EDP05578 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TGAACACAGGCGAGCGCACCGAGGTCAATATGTTGGCTGTTCGAACTAAG GGCTGGGCCCCCGCGGTGCGCTCGGAACAGCACTCGTCCACGTCCATTCGA
genomic: TGAACACAGGCAAGCGCACCGAGGTCAATATGTTGGCTGTTCGAACTAAGgtatggagcc ... aaacaaacagGGCTGGGCCCCCGCGGTGCGCTCGGAACAGCACTCGTCCGCGTCCATTCGA
gctcctcctcctcgccctcccggtgtgctgatacgccgccttctcaaacaaacagGGCTGGGCCCCCGCGGTGCGCTCGGAACAGCACTCGTCCGCGTCCATTCGAACACGGCCACGCTACCGCGCGTCTG
tgctgat putative branch site (score: 3)
ccttctca putative PPT
aaacaaa TA-rich tract