1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...agggaagggcgcagggcgtttgggacatggtgggcataccgggagctgtgctcgtgtgacaagacgcattgcccggcacgcgccacacccggccacacagGCAACGCCTGGTACTTCGGGGAGCGGGCCGAGATCTTTGACTACAAACTG
species | Chlamydomonas reinhardtii |
transcript | EDP02681 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GCGGAGATGGATGAGCCCGEST: gi|10772353|gb|AV623176.1|AV623176
genomic: GCGGAGATGGATGAGCCCG
EST: GCGGAGATGGATGAGCCCGEST: gi|10127998|gb|BE726814.1|BE726814
genomic: GCGGAGATGGATGAGCCCG
EST: GCGGAGATGGATGAGCCCGEST: gi|10773561|gb|AV624384.1|AV624384
genomic: GCGGAGATGGATGAGCCCG
EST: GCGGAGATGGATGAGCCCGEST: gi|9210100|gb|BE337015.1|BE337015
genomic: GCGGAGATGGATGAGCCCG
EST: GCGGAGATGGATGAGCCCG
genomic: GCGGAGATGGATGAGCCCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| agggaagggcgcagggcgtttgggacatggtgggcataccgggagctgtgctcgtgtgacaagacgcattgcccggcacgcgccacacccggccacacagGCAACGCCTGGTACTTCGGGGAGCGGGCCGAGATCTTTGACTACAAACTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - -gcgtttg
- - - - - - - - - - - - - - - - -gcatacc
- - - - - - - - - - - - - - - - - - - - - - -ctgtgct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -agacgca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cacgcgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cacaccc