Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtccgtaatacatttgcgcttagttacaagctgcgtggcaactacggacacgcacccaaccctcagcacccgacgtgtgcgcagGTGGCTATGCACAACACGCCGGACGATTGCTGGGTGTCTTTCCTAGGTGGCGTGTACAATCTGACGGACCTTATAAAG

Basic information

species Chlamydomonas reinhardtii
transcript EDP01830
intron # 1
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15703742|gb|BI728047.1|BI728047
EST:     CGGAGATACTACACGCCCTACGAG                         GTGGCTATGCACAACACGCCGGACGATTGCTGGGTGTCTTTCCTAGGTGGC
genomic: CGGAGATACTACACGCCCTACGAGgtccgtaata ... gtgtgcgcagGTGGCTATGCACAACACGCCGGACGATTGCTGGGTGTCTTTCCTAGGTGGC
EST: gi|16436233|gb|BM001453.1|BM001453
EST:     CGGAGATACTACACGCCCTACGAG                         GTGGCTATGCACAACACGCCGGACGATTGCTGGGTGTCTTTCCTAGGTGGC
genomic: CGGAGATACTACACGCCCTACGAGgtccgtaata ... gtgtgcgcagGTGGCTATGCACAACACGCCGGACGATTGCTGGGTGTCTTTCCTAGGTGGC