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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGGCACAAAGAACGCGTCGGCGGAGGAGGTGGAGGCGGCGGCGCGCGCCGCCAACGCGCACACCTTCATCAGCAACCTGCCCCAGGGCTACGAGACGCAGgtgcgtagcatcatggggcgccgggacgggcggcggtggagcgaggccgggcagaatgcgtttgtgtgcagcgtagtggatactcacatgccatttgtgatgtcatacctttgcag

Basic information

species Chlamydomonas reinhardtii
transcript EDP00406
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|49470631|gb|BP098492.1|BP098492
EST:     CCAACGCGCACACCTTTATCAGCAACCTGCCCCAGGGCTATGAGACGCAG                         GTCGGCGAGCGCGGTGTGCAGCTGAGTGGCGGTCAGAAGCAGCGCATTGCC
genomic: CCAACGCGCACACCTTCATCAGCAACCTGCCCCAGGGCTACGAGACGCAGgtgcgtagca ... acctttgcagGTCGGCGAACGCGGTGTGCAGCTGAGTGGCGGCCAGAAGCAGCGCATTGCC
EST: gi|49466891|gb|BP094804.1|BP094804
EST:     CCAACGCGCACACCTTCATCAGCAACCTGCCCCAGGGCTACGAGACGCAG                         GTCGGCGAACGCGGTGTGCAGCTGAGTGGCGGCCAGAAGCAGCGCATTGCC
genomic: CCAACGCGCACACCTTCATCAGCAACCTGCCCCAGGGCTACGAGACGCAGgtgcgtagca ... acctttgcagGTCGGCGAACGCGGTGTGCAGCTGAGTGGCGGCCAGAAGCAGCGCATTGCC
EST: gi|49466152|gb|BP094065.1|BP094065
EST:     GCGCACACCTTTATCAGCAACCTGCCCCAGGGCTATGAGACGCAG                         GTCGGCGAGCGCGGTGTGCAGCTGAGTGGCGGTCAGAAGCAGCGCATTGCC
genomic: GCGCACACCTTCATCAGCAACCTGCCCCAGGGCTACGAGACGCAGgtgcgtagca ... acctttgcagGTCGGCGAACGCGGTGTGCAGCTGAGTGGCGGCCAGAAGCAGCGCATTGCC