1 5' 3' | 2 5' 3' | 3 5' 3' |
GAAGCCTGTCAGTGTGGCTGGCTCAGCAGCGCGGGGCGGCAGGGCGGGCTCTGTCGCGAGCCACGCCAGGAGCGGGGCCAACACGGAGACGGCAACCACGgtgagcgggagcgaccgggcccttgtgcacggctgcaacacgctggcagctagggtggcgccacggcagggcagcgtgtcaatgcatgtgcacatccatg...
species | Chlamydomonas reinhardtii |
transcript | EDO98611 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTGTCGCGAGCCACGCCAGGAGCGGGGCCAACACGGAGACGGCAACCACG CTGATGCGGCGGCTGGAGGGCCTGGAGGACGCGCTGGCTGAGGAGCGCATGEST: gi|14232547|gb|BG851363.1|BG851363
genomic: CTGTCGCGAGCCACGCCAGGAGCGGGGCCAACACGGAGACGGCAACCACGgtgagcggga ... acgaccacagCTGATGCGGCGGCTGGAGGGCCTGGAGGACGCGCTGGCTGAGGAGCGCATG
EST: CTGTCGCGAGCCACGCCAGGAGCGGGGCCAACACGGAGACGGCAACCACG CTGATGCGGCGGCTGGAGGGCCTGGAGGACGCGCTGGCTGAGGAGCGCATEST: gi|23366672|gb|BU654491.1|BU654491
genomic: CTGTCGCGAGCCACGCCAGGAGCGGGGCCAACACGGAGACGGCAACCACGgtgagcggga ... acgaccacagCTGATGCGGCGGCTGGAGGGCCTGGAGGACGCGCTGGCTGAGGAGCGCAT
EST: CTGTCGCGAGCCACGCCAGGAGCGGGGCCAACACGGAGACGGCAACCACG CTGATGCGGCGGCTGGAGGGCCTGGAGGACGCGCTGGCTGAGGAGCGCATGEST: gi|14227325|gb|BG846141.1|BG846141
genomic: CTGTCGCGAGCCACGCCAGGAGCGGGGCCAACACGGAGACGGCAACCACGgtgagcggga ... acgaccacagCTGATGCGGCGGCTGGAGGGCCTGGAGGACGCGCTGGCTGAGGAGCGCATG
EST: CTGTCGCGAGCCACGCCAGGAGCGGGGCCAACACGGAGACGGCAACCACG CTGATGCGGCGGCTGGAGGGCCTGGAGGACGCGCTGGCTGAGGAGCGCATGEST: gi|23365901|gb|BU653721.1|BU653721
genomic: CTGTCGCGAGCCACGCCAGGAGCGGGGCCAACACGGAGACGGCAACCACGgtgagcggga ... acgaccacagCTGATGCGGCGGCTGGAGGGCCTGGAGGACGCGCTGGCTGAGGAGCGCATG
EST: CTGTCGCGAGCCACGCCAGGAGCGGGGCCAACACGGAGACGGCAACCACG CTGATGCGGCGGCTGGAGGGCCTGGAGGACGCGCTGGCTGAGGAGCGCATG
genomic: CTGTCGCGAGCCACGCCAGGAGCGGGGCCAACACGGAGACGGCAACCACGgtgagcggga ... acgaccacagCTGATGCGGCGGCTGGAGGGCCTGGAGGACGCGCTGGCTGAGGAGCGCATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGCCTGTCAGTGTGGCTGGCTCAGCAGCGCGGGGCGGCAGGGCGGGCTCTGTCGCGAGCCACGCCAGGAGCGGGGCCAACACGGAGACGGCAACCACGgtgagcgggagcgaccgggcccttgtgcacggctgcaacacgctggcagctagggtggcgccacggcagggcagcgtgtcaatgcatgtgcacatccatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgtgcac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aacacgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgtcaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - catgtgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -acatcca