Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|49469155|gb|BP097016.1|BP097016EST: GGCGAAGCATCACCCAGATCTTATTATGTGCATGAAGCAGCCAGGCGTGG CCATTGGCCGCCTCTGCGAGAAGGATGATGGAAAGTGCCCAATTTGCGACT
genomic: GGCGAAGCATCACCCAGATCTTATTATGTGCATGAAGCAGCCAGGCGTGGgtaagtccat ... ttgctcgcagCCATTGGCCGCCTCTGCGAGAAGGATGATGGAAAGTGCCCAATTTGCGACT
EST:
gi|9028116|gb|BE238156.1|BE238156EST: GGCGAAGCATCACCCAGATCTTATTATGTGCATGAAGCAGCCAGGCGTGG CCATTGGCCGCCTCTGCGAGAAGGATGATGGAAAGTGCCCAATTTGCGACT
genomic: GGCGAAGCATCACCCAGATCTTATTATGTGCATGAAGCAGCCAGGCGTGGgtaagtccat ... ttgctcgcagCCATTGGCCGCCTCTGCGAGAAGGATGATGGAAAGTGCCCAATTTGCGACT
EST:
gi|15692131|gb|BI716436.1|BI716436EST: GGCGAAGCATCACCCAGATCTTATTATGTGCATGAAGTAGCCAGGCGTGG CCATTGGCCGCCTCTGCGAGAAGGATGATGGAAAGTGCCCAATTTGCGACT
genomic: GGCGAAGCATCACCCAGATCTTATTATGTGCATGAAGCAGCCAGGCGTGGgtaagtccat ... ttgctcgcagCCATTGGCCGCCTCTGCGAGAAGGATGATGGAAAGTGCCCAATTTGCGACT
EST:
gi|10772095|gb|AV622918.1|AV622918EST: GGCGAAGCATCACCCAGATCTTATTATGTGCATGAAGCAGCCAGGCGTGG CCATTGGCCGCCTCTGCGAGAAGGATGATGGAAAGTGCCCAATTTGCGACT
genomic: GGCGAAGCATCACCCAGATCTTATTATGTGCATGAAGCAGCCAGGCGTGGgtaagtccat ... ttgctcgcagCCATTGGCCGCCTCTGCGAGAAGGATGATGGAAAGTGCCCAATTTGCGACT
EST:
gi|8933075|gb|BE227836.1|BE227836EST: GGCGAAGCATCACCCAGATCTTATTATGTGCATAAAGCAGCCAGGCGTGG CCATTGGCCGCCTCTGCGAGAAGGATGATGGAAAGTGCCCAATTTGCGACT
genomic: GGCGAAGCATCACCCAGATCTTATTATGTGCATGAAGCAGCCAGGCGTGGgtaagtccat ... ttgctcgcagCCATTGGCCGCCTCTGCGAGAAGGATGATGGAAAGTGCCCAATTTGCGACT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CGACGTGCGGAGCAGCCTCGCGCGGTCTTGCCGGGCGCGTGAAGAGCCATGGCGAAGCATCACCCAGATCTTATTATGTGCATGAAGCAGCCAGGCGTGGgtaagtccatatgtcgtggcgtcggctcgcagcaatcgactaaccggccctactcctttgctcgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC