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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGCTTGTGACAAATGTACAAACGGCGGCCCTATGCGAGgtaagctcaccatccctggttgcgccttgcggctgtctctcgtcctgccctgtgcacccctcccacatgtcccccccccgtcctctccgcacgggctccag

Basic information

species Chlamydomonas reinhardtii
transcript EDO97070
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15692583|gb|BI716888.1|BI716888
EST:     ATGCTTGTGACAAATGTACAAACGGCGGCCCTATGCGAG                         GGTTGGGCGTGACGCTCAAGGACTGGTGCGAGGAGACGTCGTCGCACTATG
genomic: ATGCTTGTGACAAATGTACAAACGGCGGCCCTATGCGAGgtaagctcac ... cgggctccagGGTTGGGCGTGACGCTCAAGGACTGGTGCGAGGAGACGTCGTCGCACTATG
EST: gi|15372305|gb|BI531731.1|BI531731
EST:     ATGCTTGTGACAAATGTACAAACGGCGGCCCTATGCGAG                         GGTTGGGCGTGACGCTCAAGGACTGGTGCGAGGAGACGTCGTCGCACTATG
genomic: ATGCTTGTGACAAATGTACAAACGGCGGCCCTATGCGAGgtaagctcac ... cgggctccagGGTTGGGCGTGACGCTCAAGGACTGGTGCGAGGAGACGTCGTCGCACTATG
EST: gi|10769559|gb|AV620384.1|AV620384
EST:     ATGCTTGTGACAAATGTACAAACGGCGGCCCTATGCGAG                         GGTTGGGCGTGACGCTCAAGGACTGGTGCGAGGAGACGTCGTCGCACTATG
genomic: ATGCTTGTGACAAATGTACAAACGGCGGCCCTATGCGAGgtaagctcac ... cgggctccagGGTTGGGCGTGACGCTCAAGGACTGGTGCGAGGAGACGTCGTCGCACTATG
EST: gi|9210899|gb|BE337814.1|BE337814
EST:     ATGCTTGTGACAAATGTACAAACGGCGGCCCTATGCGAG                         GGTTGGGCGTGACGCTCAAGGACTGGTGCGAGGAGACGTCGTCGCACTATG
genomic: ATGCTTGTGACAAATGTACAAACGGCGGCCCTATGCGAGgtaagctcac ... cgggctccagGGTTGGGCGTGACGCTCAAGGACTGGTGCGAGGAGACGTCGTCGCACTATG
EST: gi|6543692|gb|AV389476.1|AV389476
EST:     ATGCTTGTGACAAATGTACAAACGGCGGCCCTATGCGAG                         GGTTGGGCGTGACGCTCAAGGACTGGTG
genomic: ATGCTTGTGACAAATGTACAAACGGCGGCCCTATGCGAGgtaagctcac ... cgggctccagGGTTGGGCGTGACGCTCAAGGACTGGTG