1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaaatttcaaccttggatctttggtagattttgctgttgtctcgtgaatattcatcgccagttttggcgggaaaatgtttctgcggtggtttgtttttgattgaatctgaaacttactattgtcttgtgctctcgattacattcttcagATCTTATCGGAAAGCTTTAGCGGCAGAGAGAAAGAGTGAATAAGTCGAGACTTCTCTG
species | Arabidopsis thaliana |
transcript | AT5G64540.3 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CTTCAATCGTTCTCGCTTTTGATTTCTTCAAGTTCTGATGATGATTATCG ATCTTATCGGAAAGCTTTAGCGGCAGAGAGAAAGAGTGAATAAGTCGAGACEST: gi|116432283|gb|EG474875.1|EG474875
genomic: CTTCAATCGTTCTCGCTTTTGATTTCTTCAAGTTCTGATGATGATTATCGgtaaatttca ... cattcttcagATCTTATCGGAAAGCTTTAGCGGCAGAGAGAAAGAGTGAATAAGTCGAGAC
EST: TCAAGTTCTGACGATGATTATCG ATCTTATCGGAAAGCTTTAGCGGCAGAGAGAAAGAGTGAATAAGTCGAGACEST: gi|116432277|gb|EG474869.1|EG474869
genomic: TCAAGTTCTGATGATGATTATCGgtaaatttca ... cattcttcagATCTTATCGGAAAGCTTTAGCGGCAGAGAGAAAGAGTGAATAAGTCGAGAC
EST: CTTCAATCGTTCTCGCTTTTGATTTCTTCAAGTTCTGATGATGATTATCG ATCTTATCGGAAAGCTTTAGCGGCAGAGAGAAAGAGTGAATAAGTCGAGACEST: gi|116432286|gb|EG474878.1|EG474878
genomic: CTTCAATCGTTCTCGCTTTTGATTTCTTCAAGTTCTGATGATGATTATCGgtaaatttca ... cattcttcagATCTTATCGGAAAGCTTTAGCGGCAGAGAGAAAGAGTGAATAAGTCGAGAC
EST: GCTTTTGATTTCTTCAAGTTCTGATGATGATTATCG ATCTTATCGGAAAGCTTTAGCGGCAGAGAGAAAGAGTGAATAAGTCGAGAC
genomic: GCTTTTGATTTCTTCAAGTTCTGATGATGATTATCGgtaaatttca ... cattcttcagATCTTATCGGAAAGCTTTAGCGGCAGAGAGAAAGAGTGAATAAGTCGAGAC
ttttgattgaatctgaaacttactattgtcttgtgctctcgattacattcttcagATCTTATCGGAAAGCTTTAGCGGCAGAGAGAAAGAGTGAATAAGTCGAGACTTCTCTG
aacttac putative branch site (score: 2)
cattcttc putative PPT
ttactatt TA-rich tract