1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GAAAGTTCTCGCGGAGGCAGAGAAAGATAATCCAGATTGGAGTAAATTTGGGAGTGAGAATCCACCGGCTAAGTTTCATGAACCATCACCTTCTTCAGTGgtatggctcttcttaaaatctatggaagcattttaaagttaggctgaggtggttaatagcatcatcgtatagtatcgatgtgttctctagaagaacaagt...
species | Arabidopsis thaliana |
transcript | AT5G53330.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AGAATCCACCGGCTAAGTTTCATGAACCATCACCTTCTTCAGTG GGTCAAATGCAGGGTGTAGATCATGTAGTGATGAAATATACTGCTTCTGEST: gi|86083697|gb|DR379456.1|DR379456
genomic: AGAATCCACCGGCTAAGTTTCATGAACCATCACCTTCTTCAGTGgtatggctct ... ccaaatgcagGGTCAAATGCAGGGTGTAGATCATGTAGTGATGAAATATACTGCTTCTG
EST: GGAGTGAGAATCCACCGGCTAAGTTTCATGAACCATCACCTTCTTCAGTG GGTCAAATGCAGGGTGTAGATCATGTAGTGATGAAATATACTGCTTCTGGG
genomic: GGAGTGAGAATCCACCGGCTAAGTTTCATGAACCATCACCTTCTTCAGTGgtatggctct ... ccaaatgcagGGTCAAATGCAGGGTGTAGATCATGTAGTGATGAAATATACTGCTTCTGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAAGTTCTCGCGGAGGCAGAGAAAGATAATCCAGATTGGAGTAAATTTGGGAGTGAGAATCCACCGGCTAAGTTTCATGAACCATCACCTTCTTCAGTGgtatggctcttcttaaaatctatggaagcattttaaagttaggctgaggtggttaatagcatcatcgtatagtatcgatgtgttctctagaagaacaagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctcttctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaagaac