1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtatagcaagacttggtggagatacattgtttagtttgtaataaaagctgacggattcctttcaaaggtcatatcggattgatcaatttacatagtttcttgtctgttcttgttgtagTTGTAAGCGTAGGTGCGGCTCTCTTCTTGTTTCAACAGTTAGCCGGGATAAACGCAGTTGTGTATTACTCCACATCGGTATTCCGTAGTGCGGGAATCCA
species | Arabidopsis thaliana |
transcript | AT5G16150.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: TGAGCCGGAGGCAGGATGGTTTGATCTATTCAGCAGCCGCTACTGGAAAG TTGTAAGCGTAGGTGCGGCTEST: gi|125315264|gb|EL329349.1|EL329349
genomic: TGAGCCGGAGGCAGGATGGTTTGATCTATTCAGCAGCCGCTACTGGAAAGgtatagcaag ... cttgttgtagTTGTAAGCGTAGGTGCGGCT
EST: CCGGAGGCAGGATGGTTTGATCTATTCAGCAGCCGCTACTGGAAAG TTGTAAGCGTAGGTGCGGCTCTCTTCTTGTTTCAACAGTTAGCCGGGATAA
genomic: CCGGAGGCAGGATGGTTTGATCTATTCAGCAGCCGCTACTGGAAAGgtatagcaag ... cttgttgtagTTGTAAGCGTAGGTGCGGCTCTCTTCTTGTTTCAACAGTTAGCCGGGATAA
aaaggtcatatcggattgatcaatttacatagtttcttgtctgttcttgttgtagTTGTAAGCGTAGGTGCGGCTCTCTTCTTGTTTCAACAGTTAGCCGGGATAAACGCAGTTGTGTATTACTCCACATCGGTATTCCGTAGTGCGGGAATCCA
gattgat putative branch site (score: 4)
tttcttgtctgttctt putative PPT
aatttacatagttt TA-rich tract