1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtagttccaccattcaaagaccaaagaatttatatttatatgaaagataagaaatttttatctaaatgtcacttttgtttttgttgttgttacagCTACGGATAGAACAACGAAAAGGCTGTGTCTTTGAAGGATGGAAGGAAGGGACTATATATTTTCCACCAACTTACAAATACTCTAACAATTCAGATATTT
species | Arabidopsis thaliana |
transcript | AT3G63240.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: AAGCTCTTGTCGAGATGAGAGATTGGAGGGCCTTGCTTGAGAAAGACCAG CTACGGATAGAACAACGAAAAGGCTGTGTCTTTGAAGGATGGAAGGAAGGGEST: gi|116406167|gb|EG448759.1|EG448759
genomic: AAGCTCTTGTCGAGATGAGAGATTGGAGGGCCTTGCTTGAGAAAGACCAGgtagttccac ... gttgttacagCTACGGATAGAACAACGAAAAGGCTGTGTCTTTGAAGGATGGAAGGAAGGG
EST: AAGCTCTTGTCGAGATGAGAGATTGGAGGGCCTTGCTTGAGAAAGACCAG CTACGGATAGAACAACGAAAAGGCTGTGTCTTTGAAGGATGGAAGGAAGGG
genomic: AAGCTCTTGTCGAGATGAGAGATTGGAGGGCCTTGCTTGAGAAAGACCAGgtagttccac ... gttgttacagCTACGGATAGAACAACGAAAAGGCTGTGTCTTTGAAGGATGGAAGGAAGGG
tgaaagataagaaatttttatctaaatgtcacttttgtttttgttgttgttacagCTACGGATAGAACAACGAAAAGGCTGTGTCTTTGAAGGATGGAAGGAAGGGACTATATATTTTCCACCAACTTACAAATACTCTAACAATTCAGATATTT
atctaaa putative branch site (score: 3)
ataagaaatttttatc TA-rich tract