1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtataacactataatttatcgagaagattactttaagttgaagattctattcatgtgtttcaccttcctctgtctaatgtgcagGTTTATCAGAGCTTAGTTTCGATCCAAGACCAGAAATCAGGAAAAGCGCACTACAGATTATGTTTGATACCTTACGCAACCATGGCCATTTATTTTCTCT
species | Arabidopsis thaliana |
transcript | AT3G60860.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: AGATTGTAAACAACAATCATCTTTATTTTTGGTTTCCCTTACTATCAG GTTTATCAGAGCTTAGTTTCGATCCAAGACCAGAAATCAGGAAAAGCGCAC
genomic: AGATTGTAAACAACAATCATCTTTATTTTTGGTTTCCCTTACTATCAGgtataacact ... taatgtgcagGTTTATCAGAGCTTAGTTTCGATCCAAGACCAGAAATCAGGAAAAGCGCAC
actttaagttgaagattctattcatgtgtttcaccttcctctgtctaatgtgcagGTTTATCAGAGCTTAGTTTCGATCCAAGACCAGAAATCAGGAAAAGCGCACTACAGATTATGTTTGATACCTTACGCAACCATGGCCATTTATTTTCTCT
gtctaat putative branch site (score: 3)
tttcaccttcctctgt CT-rich tract
attctatt TA-rich tract