1 5' 3' | 2 5' 3' | 3 5' 3' |
GCGGGAGTTTGACATGGCTGCAGAGCTTCTTATGAGGCAGCTGCTCAAATTGGATGGCATTGAGGCTGAAGGGGACGCTAAAGTACAGCGTAAGGCTGAGgttagttttcttgctttgttaagcatgtttacacggtaagagtgttaatagagttggaagatatatgagttgtggtttgtgttggcag
species | Arabidopsis thaliana |
transcript | AT3G51780.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGGATGGCATTGAGGCTGAAGGGGACGCTAAAGTACAGCGTAAGGCTGAG GTACGTAGAATCCAAAACTTGCAGGAGGCTGTGGATAAGTTGAAGGEST: gi|164213157|gb|EL987779.1|EL987779
genomic: TGGATGGCATTGAGGCTGAAGGGGACGCTAAAGTACAGCGTAAGGCTGAGgttagttttc ... gtgttggcagGTACGTAGAATCCAAAACTTGCAGGAGGCTGTGGATAAGTTGAAGG
EST: TGGATGGCATTGAGGCTGAAGGGGACGCTAAAGTACAGCGTAAGGCTGAG GTACGTAGAATCC
genomic: TGGATGGCATTGAGGCTGAAGGGGACGCTAAAGTACAGCGTAAGGCTGAGgttagttttc ... gtgttggcagGTACGTAGAATCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGGGAGTTTGACATGGCTGCAGAGCTTCTTATGAGGCAGCTGCTCAAATTGGATGGCATTGAGGCTGAAGGGGACGCTAAAGTACAGCGTAAGGCTGAGgttagttttcttgctttgttaagcatgtttacacggtaagagtgttaatagagttggaagatatatgagttgtggtttgtgttggcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG