Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGTGAAACTTTCCGGCGATTTAACAGAGTCATGATGGAAATACGAACTCCGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttctcttctttttctccttcgtccttcttaaaaccgagaagtgaatcatgttgagagctgtcttcaatgttgttttgacatctatgagactcatgggttttctatttgtcgataaatttatcaaagaatcgattgaaagttgcaaactttgtatctgaattggttgtttttggaatttgtag

Basic information

species Arabidopsis thaliana
transcript AT3G23620.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86042812|gb|DR338567.1|DR338567
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042773|gb|DR338528.1|DR338528
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042802|gb|DR338557.1|DR338557
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042771|gb|DR338526.1|DR338526
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042792|gb|DR338547.1|DR338547
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042770|gb|DR338525.1|DR338525
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGWTGC
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAG-TGC
EST: gi|86042775|gb|DR338530.1|DR338530
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042807|gb|DR338562.1|DR338562
EST:     CGAARACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042787|gb|DR338542.1|DR338542
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042810|gb|DR338565.1|DR338565
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042793|gb|DR338548.1|DR338548
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042799|gb|DR338554.1|DR338554
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042774|gb|DR338529.1|DR338529
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042794|gb|DR338549.1|DR338549
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042814|gb|DR338569.1|DR338569
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042805|gb|DR338560.1|DR338560
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042795|gb|DR338550.1|DR338550
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042790|gb|DR338545.1|DR338545
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042777|gb|DR338532.1|DR338532
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042788|gb|DR338543.1|DR338543
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042783|gb|DR338538.1|DR338538
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATANTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042813|gb|DR338568.1|DR338568
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042809|gb|DR338564.1|DR338564
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042798|gb|DR338553.1|DR338553
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042772|gb|DR338527.1|DR338527
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042778|gb|DR338533.1|DR338533
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGATGC
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAG-TGC
EST: gi|86042786|gb|DR338541.1|DR338541
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042769|gb|DR338524.1|DR338524
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042808|gb|DR338563.1|DR338563
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|164216180|gb|EL968348.1|EL968348
EST:     GCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCAT
genomic: GCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCAT
EST: gi|86042776|gb|DR338531.1|DR338531
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042768|gb|DR338523.1|DR338523
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042784|gb|DR338539.1|DR338539
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042781|gb|DR338536.1|DR338536
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042797|gb|DR338552.1|DR338552
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042800|gb|DR338555.1|DR338555
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042815|gb|DR338570.1|DR338570
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042780|gb|DR338535.1|DR338535
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042801|gb|DR338556.1|DR338556
EST:     CGARGACTGGCAAAGC-AAGCGTGTTCTCGAAAGCCGAGCTCYTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGACCAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042785|gb|DR338540.1|DR338540
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042804|gb|DR338559.1|DR338559
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042789|gb|DR338544.1|DR338544
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTTGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042811|gb|DR338566.1|DR338566
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042796|gb|DR338551.1|DR338551
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042817|gb|DR338572.1|DR338572
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042806|gb|DR338561.1|DR338561
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042816|gb|DR338571.1|DR338571
EST:     CGAAGACTGGCAAAG-CAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
EST: gi|86042791|gb|DR338546.1|DR338546
EST:     CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTG                         GTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT
genomic: CGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttct ... gaatttgtagGTTGAAACTGGGAAGAAGACGTTGATACTTCATGGAACAAAGACGAGTGCT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TTGTGAAACTTTCCGGCGATTTAACAGAGTCATGATGGAAATACGAACTCCGAAGACTGGCAAAGCCAAGCGTGTTCTCGAAAGCCGAGCTCCTAAGTTGgtaaagttctcttctttttctccttcgtccttcttaaaaccgagaagtgaatcatgttgagagctgtcttcaatgttgttttgacatctatgagactcatgggttttctatttgtcgataaatttatcaaagaatcgattgaaagttgcaaactttgtatctgaattggttgtttttggaatttgtag

- - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAAAG