1 5' 3' | 2 5' 3' | 3 5' 3' |
GTCCATCATCCTGAAAGAGCCATTGATTTCAAAAACATTGTGGGTCCTGCTCTGGCTCTTATCAACCCTTCTCTCGTCTTAATCACCGGTGATCTCACAGgtttatatctctctcctgaattaaggacttggttcgaaattctcaatctttcattggttcgttagatgagcttcagtgatgttgcttctgggttcttagg...
species | Arabidopsis thaliana |
transcript | AT3G03305.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCTGGCTCTTATCAACCC-TCTCTCGTCTTAATCACCGGTGATCTCACAG ATGGGAAAAGCAAAGACATGTTAACAATGAAGTTAAATGEST: gi|124755426|gb|EH845556.1|EH845556
genomic: TCTGGCTCTTATCAACCCTTCTCTCGTCTTAATCACCGGTGATCTCACAGgtttatatct ... ggttaatcagATGGGAAAAGCAAAGACATGTTAACAATGAAGTTAAATG
EST: TCTGGCTCTTATCAACCCTTCTCTCGTCTTAATCACCGGTGATCTCACAG ATGGGAAAAGCAAAGACATGTTAACAATGAAGTTAAATG
genomic: TCTGGCTCTTATCAACCCTTCTCTCGTCTTAATCACCGGTGATCTCACAGgtttatatct ... ggttaatcagATGGGAAAAGCAAAGACATGTTAACAATGAAGTTAAATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCCATCATCCTGAAAGAGCCATTGATTTCAAAAACATTGTGGGTCCTGCTCTGGCTCTTATCAACCCTTCTCTCGTCTTAATCACCGGTGATCTCACAGgtttatatctctctcctgaattaaggacttggttcgaaattctcaatctttcattggttcgttagatgagcttcagtgatgttgcttctgggttcttagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctctctcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tctcaatc