1 5' 3' | 2 5' 3' |
gtttgttgttcttacaaattaagcatcatatgttgtcaatctcgtcataatgatcatgtatttctaaagtcttatggtaataaaacttatgggcgccaaatcatatatgtgtaattagGAGCTTATCCTACGCCGCCAGTGTCTACCGGCCCTTATATGACACCGCCACCGCTCGGTTACCCGACGAGCGACATCAGTCATGCCACGGTGGCTCCGGT
species | Arabidopsis thaliana |
transcript | AT2G32190.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: ATCATAATCTGGTTCGAAGATGAGCCAATACACCCAAAACCAATCTTCAG GAGCTTATCCTACGCCGCCAGTGTCTACCGGCCCTTATATGACACCGCCACEST: gi|86080881|gb|DR376638.1|DR376638
genomic: ATCATAATCT-GTTCGAAGATGAGCCAATACAGCCAAAACCAATCTTCAGgtttgttgtt ... gtgtaattagGAGCTTATCCTACGCCGCCAGTGTCTACCGGCCCTTATATGACACCGCCAC
EST: AATCATAATCTGTTCGAAGATGAGCCAATACAGCCAAAACCAATCTTCAG GAGCTTATCCTACGCCGCCAGTGTCTACCGGCCCTTATATGACACCGCCACEST: gi|47829166|gb|CK118850.1|CK118850
genomic: AATCATAATCTGTTCGAAGATGAGCCAATACAGCCAAAACCAATCTTCAGgtttgttgtt ... gtgtaattagGAGCTTATCCTACGCCGCCAGTGTCTACCGGCCCTTATATGACACCGCCAC
EST: AATCATAATCTGTTCGAAGATGAGCCAATACAGCCAAAACCAATCTTCAG GAGCTTATCCTACGCCGCCAGTGTCTACCGGCCCTTATATGACACCGCCACEST: gi|116449502|gb|EG492094.1|EG492094
genomic: AATCATAATCTGTTCGAAGATGAGCCAATACAGCCAAAACCAATCTTCAGgtttgttgtt ... gtgtaattagGAGCTTATCCTACGCCGCCAGTGTCTACCGGCCCTTATATGACACCGCCAC
EST: AATCATAATCTGTTCGAAGATGAGCCAATACAGCCAAAACCAATCTTCAG GAGCTTATCCTACGCCGCCAGTGTCTACCGGCCCTTATATGACACCGCCAC
genomic: AATCATAATCTGTTCGAAGATGAGCCAATACAGCCAAAACCAATCTTCAGgtttgttgtt ... gtgtaattagGAGCTTATCCTACGCCGCCAGTGTCTACCGGCCCTTATATGACACCGCCAC
ctaaagtcttatggtaataaaacttatgggcgccaaatcatatatgtgtaattagGAGCTTATCCTACGCCGCCAGTGTCTACCGGCCCTTATATGACACCGCCACCGCTCGGTTACCCGACGAGCGACATCAGTCATGCCACGGTGGCTCCGGT
ttctaaa putative branch site (score: 2)
atatatgtgtaatta TA-rich tract