Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|116469662|gb|EG512254.1|EG512254EST: CGCCGATCTTCTCGGTCACGGCCGTTCCGATGGTATCCGCTGCTACATGG GTGATATGGAGAAAGTTGCAGCAACATCATTGGCTTTCTTCAAGCATGTTC
genomic: CGCCGATCTTCTCGGTCACGGCCGTTCCGATGGTATCCGCTGCTACATGGgttcgtttac ... tggttattagGTGATATGGAGAAAGTTGCAGCAACATCATTGGCTTTCTTCAAGCATGTTC
EST:
gi|116421128|gb|EG463720.1|EG463720EST: CGCCGATCTTCTCGGTCACGGCCGTTCCGATGGTATCCGCTGCTACATGG GTGATATGGAGAAAGTTGCAGCAACATCATTGGCTTTCTTCAAGCATGTTC
genomic: CGCCGATCTTCTCGGTCACGGCCGTTCCGATGGTATCCGCTGCTACATGGgttcgtttac ... tggttattagGTGATATGGAGAAAGTTGCAGCAACATCATTGGCTTTCTTCAAGCATGTTC
EST:
gi|164085362|gb|ES216156.1|ES216156EST: CGCCGATCTTCTCGGTCACGGCCGTTCCGATGGTATCCGCTGCTACATGG GTGATATGGAGAAAGTTGCAGCAACATCATTGGCTTTCTTC
genomic: CGCCGATCTTCTCGGTCACGGCCGTTCCGATGGTATCCGCTGCTACATGGgttcgtttac ... tggttattagGTGATATGGAGAAAGTTGCAGCAACATCATTGGCTTTCTTC
EST:
gi|164201157|gb|ES129484.1|ES129484EST: CGCCGATCTTCTCGGTCACGGCCGTTCCGATGGTATCCGCTGCTACATGG GTGATATGGAGAAAGTTGCAGCAACATCATTGGCTTTCTTC
genomic: CGCCGATCTTCTCGGTCACGGCCGTTCCGATGGTATCCGCTGCTACATGGgttcgtttac ... tggttattagGTGATATGGAGAAAGTTGCAGCAACATCATTGGCTTTCTTC
EST:
gi|116434958|gb|EG477550.1|EG477550EST: CGCCGATCTTCTCGGTCACGGCCGTTCCGATGGTATCCGCTGCTACATGG GTGATATGGAGAAAGTTGCAGCAACATCATTGGCTTTCTTCAAGCATGTTC
genomic: CGCCGATCTTCTCGGTCACGGCCGTTCCGATGGTATCCGCTGCTACATGGgttcgtttac ... tggttattagGTGATATGGAGAAAGTTGCAGCAACATCATTGGCTTTCTTCAAGCATGTTC
EST:
gi|164058178|gb|ES109513.1|ES109513EST: CGCCGATCTTCTCGGTCACGGCCGTTCCGATGGTATCCGCTGCTACATGG GTGATATGGNGAAAGTTGCAGCAACATCATTGGCTTT
genomic: CGCCGATCTTCTCGGTCACGGCCGTTCCGATGGTATCCGCTGCTACATGGgttcgtttac ... tggttattagGTGATATGGAGAAAGTTGCAGCAACATCATTGGCTTT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTTCAGAAGATCTGTATGAGTTTCTCTAGTTGGGGTTACGCTGTTTTCGCCGCCGATCTTCTCGGTCACGGCCGTTCCGATGGTATCCGCTGCTACATGGgttcgtttacttcgttcctctgttttgataagataaattttccatctttgtgtaattgataagataatttacgatctttaggtgattaaagattggatttttatggttattag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT