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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGGGAATCTTACTAACTTGGTGAGCTTGGATCTGTACCTAAATCATTTCACTGGCCCAATCCCAGATTCATTGGGCAAGTTGTCAAAATTGCGTTTCCTgtgagtatacttgttctattcatacgctgtggacattctgattattttttaaaatgtcaatagctattatttttctgttcaagggtaaaatcctgttctggtgcttgtcaatctctacgtacttgatcttttggatatcaggatggatcttaattctgttttcctattatgtctaaggatag

Basic information

species Glycine max
transcript GLYMA20G31320.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA20G31320.1 (Glycine max), 5'ss of exon 4
lower sequence: GRMZM2G384439_T02 (Zea mays), 5'ss of exon 4
TGGGGAATCTTACTAACTTGGTGAGCTTGGATCTGTACCTAAATCATTTCACTGGCCCAATCCCAGATTCATTGGGCAAGTTGTCAAAATTGCGTTTCCTgtgagtatacttgttctattcatacgctgtggacattctgattattttttaaaatgtcaatagctattatttttctgttcaagggta--aaatcctgttctggtgcttgtcaatctctacgtacttgatcttttggatatcaggatggatcttaattctgttttcctattatgtctaaggatag
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TTGGGAATCTTACAAACTTGGTCAGTTTGGATTTGTACTTGAACAACTTCACTGGTCCCATACCAGATTCATTGGGGAAGCTATTGAAGCTGCGGTTCTTgtaag-atattcacattgattttccctactagttactgtagag----taaaacctgttaagagtaggaatcttttggcttacgcacactgaatctatctcagtta-------------------------------------------------------------------------------