1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TACCAGTTGATTGAAGACAAGTTAAAACTATCAAAATATTTGTCGTGGACGTTTTGTTCGTGGGCTTTTGGtataatacataatctctctccctttctctatttttatgcctcttgtattgatcatctttttcatttgataatgtctagattagtgggacaaaacaaattc...
species | Glycine max |
transcript | GLYMA18G47580.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TTAAAACTATCAAAATATTTGTCGTGGACGTTTTGTTCGTGGGCTTTTGG TAAGAGGAAGCCTGATACTGAATTCTATAAGGAAGTTGTCAG-CATCTTAAEST: gi|151411561|gb|EV281372.1|EV281372
genomic: TTAAAACTATCAAAATATTTGTCGTGGACGTTTTGTTCGTGGGCTTTTGGtataatacat ... gtgtttcaggTAAGAGGAAGCCTGATACTGAATTCTATAAGGAAGTTGTCAGGCATCTTAA
EST: TTAAAACTATCAAAATATTTGTCGTGGACGTTTTGTTCGTGGGCTTTTGG TAAGAGGAAGCCTGATACTGAATTCTATAAGGAAGTTGTCAGGCATCTTAAEST: gi|151412587|gb|EV282399.1|EV282399
genomic: TTAAAACTATCAAAATATTTGTCGTGGACGTTTTGTTCGTGGGCTTTTGGtataatacat ... gtgtttcaggTAAGAGGAAGCCTGATACTGAATTCTATAAGGAAGTTGTCAGGCATCTTAA
EST: TTAAAACTATCAAAATATTTGTCGTGGACGTTTTGTTCGTGGGCTTTTGG TAAGAGGAAGCCTGATACTGAATTCTATAAGGAAGTTGTCAGGCATCTTAAEST: gi|151400066|gb|EV269880.1|EV269880
genomic: TTAAAACTATCAAAATATTTGTCGTGGACGTTTTGTTCGTGGGCTTTTGGtataatacat ... gtgtttcaggTAAGAGGAAGCCTGATACTGAATTCTATAAGGAAGTTGTCAGGCATCTTAA
EST: TTAAAACTATCAAAATATTTGTCGTGGACGTTTTGTTCGTGGGCTTTTGG TAAGAGGAAGCCTGATACTGAATTCTATAAG-AAGTTGTCAG-CATCTTAA
genomic: TTAAAACTATCAAAATATTTGTCGTGGACGTTTTGTTCGTGGGCTTTTGGtataatacat ... gtgtttcaggTAAGAGGAAGCCTGATACTGAATTCTATAAGGAAGTTGTCAGGCATCTTAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TACCAGTTGATTGAAGACAAGTTAAAACTATCAAAATATTTGTCGTGGACGTTTTGTTCGTGGGCTTTTGGtataatacataatctctctccctttctctatttttatgcctcttgtattgatcatctttttcatttgataatgtctagattagtgggacaaaacaaattc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggacaaaa