1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...tgggtcttgttgtaaagactaaagactaaaaatagaatagaataaaaaaatacataacggacagtctgcgcttccttactaatgtcttggttttatgcagATAAAAGCGCTTAAGGACCTGGGACTGAACGTCATCAGGGGAGTAGTTACAACAGAGGGTCCCAATTTGCGGCGCAAAAAGTTCTTGGTGACACGCTT
species | Physcomitrella patens |
transcript | PP1S99_201V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CAGCTTTGGAGACAGGCTGGGTGCTCTGCTTGATACG ATAAAAGCGCTTAAGGACCTGGGACTGAACGTCATCAGGGGAGTAGTTACAEST: gi|208386153|gb|DC949064.1|DC949064
genomic: CAGCTTTGGAGACAGGCTGGGTGCTCTGCTTGATACGgttggttact ... ttttatgcagATAAAAGCGCTTAAGGACCTGGGACTGAACGTCATCAGGGGAGTAGTTACA
EST: CAATTG-GGAGATCAGCTTTGGAGACAGGCTGGGTGCTCTGCTTGATACG ATAAAAGCGCTTAAGGACCTGGGACTGAACGTCATCAGGGGAGTAGTTACAEST: gi|162190768|gb|FC367030.1|FC367030
genomic: CAATTGTGGAGATCAGCTTTGGAGACAGGCTGGGTGCTCTGCTTGATACGgttggttact ... ttttatgcagATAAAAGCGCTTAAGGACCTGGGACTGAACGTCATCAGGGGAGTAGTTACA
EST: CAATTGTGGAGATCAGCTTTGGAGACAGGCTGGGTGCTCTGCTTGATACG ATAAAAGCGCTTAAGGACCTGGGACTGAACGTCATCAGGGGAGTAGTTACAEST: gi|67571853|gb|BJ944677.1|BJ944677
genomic: CAATTGTGGAGATCAGCTTTGGAGACAGGCTGGGTGCTCTGCTTGATACGgttggttact ... ttttatgcagATAAAAGCGCTTAAGGACCTGGGACTGAACGTCATCAGGGGAGTAGTTACA
EST: CAATTGTGGAGATCAGCTTTGGAGACAGGCTGGGTGCTCTGCTTGATACG ATAAAAGCGCTTAAGGACCTGGGACTGAACGTCATCAGGGGAGTAGTTACAEST: gi|162229329|gb|FC405520.1|FC405520
genomic: CAATTGTGGAGATCAGCTTTGGAGACAGGCTGGGTGCTCTGCTTGATACGgttggttact ... ttttatgcagATAAAAGCGCTTAAGGACCTGGGACTGAACGTCATCAGGGGAGTAGTTACA
EST: CAATTGTGGAGATCAGCTTTGGAGACAGGCTGGGTGCTCTGCTTGATACG ATAAAAGCGCTTAAGGACCTGGGACTGAACGTCATCAGGGGAGTAGTTACA
genomic: CAATTGTGGAGATCAGCTTTGGAGACAGGCTGGGTGCTCTGCTTGATACGgttggttact ... ttttatgcagATAAAAGCGCTTAAGGACCTGGGACTGAACGTCATCAGGGGAGTAGTTACA
aaaaatacataacggacagtctgcgcttccttactaatgtcttggttttatgcagATAAAAGCGCTTAAGGACCTGGGACTGAACGTCATCAGGGGAGTAGTTACAACAGAGGGTCCCAATTTGCGGCGCAAAAAGTTCTTGGTGACACGCTT
tactaat putative branch site (score: 40)
ttactaat TA-rich tract