1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtacgcctccgatctcgatctctctctctctctctaagtaagaagggtacaagctttgttcatcatctgatgcgtgttctttgctattgatgtgcagCGAGGGGAAGTCCAACCGCCGCATTCGTCGAGTG
species | Oryza sativa |
transcript | LOC_Os11g44600.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTGCCTCGGGTGCCCATAGCTTTCATTGCCCTCTACTTCATCGTCCTCGT CGAGGGGAAGTCCAACCGCCGCATTCGTCGAGTGGTEST: gi|88581417|gb|CI698401.1|CI698401
genomic: CTGCCTCGGGTGCCCATAGCTTTCATTGCCCTCTACTTCATCGTCCTCGTgtacgcctcc ... tgatgtgcagCGAGGGGAAGTCCAACCGCCGCATTCGTCGAGTGGT
EST: CTGCCTCGGGTGCCCATAGCTTTCATTGCCCTCTACTTCATCGTCCTCGT CGAGGGGAAGTCCAACCGCCGCATTCGTCGAGTGEST: gi|88591807|gb|CI709862.1|CI709862
genomic: CTGCCTCGGGTGCCCATAGCTTTCATTGCCCTCTACTTCATCGTCCTCGTgtacgcctcc ... tgatgtgcagCGAGGGGAAGTCCAACCGCCGCATTCGTCGAGTG
EST: CTGCCTCGGGTGCCCATAGCTTTCATTGCCCTCTACTTCATCGTCCTCGT CGAGGGGAAGTCCAACCGCCGCATTCGTCGAGEST: gi|88368649|gb|CI651131.1|CI651131
genomic: CTGCCTCGGGTGCCCATAGCTTTCATTGCCCTCTACTTCATCGTCCTCGTgtacgcctcc ... tgatgtgcagCGAGGGGAAGTCCAACCGCCGCATTCGTCGAG
EST: CTGCCTCGGGTGCCCATAGCTTTCATTGCCCTCTACTTCATCGTCCTCGT CGAGGGGAAGTCCAACCGCCGCATTCGTCGAGTGGTEST: gi|88765789|gb|CI774883.1|CI774883
genomic: CTGCCTCGGGTGCCCATAGCTTTCATTGCCCTCTACTTCATCGTCCTCGTgtacgcctcc ... tgatgtgcagCGAGGGGAAGTCCAACCGCCGCATTCGTCGAGTGGT
EST: CTGCCTCGGGTGCCCATAGCTTTCATTGCCCTCTACTTCATCGTCCTCGT CGAGGGGAAGTCCAACCGEST: gi|88327052|gb|CI676171.1|CI676171
genomic: CTGCCTCGGGTGCCCATAGCTTTCATTGCCCTCTACTTCATCGTCCTCGTgtacgcctcc ... tgatgtgcagCGAGGGGAAGTCCAACCG
EST: CTGCCTCGGGTGCCCATAGCTTTCATTGCCCTCTACTTCATCGTCCTCGT CGAGGGGAAGTCCAACCGCCGCATTCGTCGAGTGEST: gi|88589644|gb|CI708442.1|CI708442
genomic: CTGCCTCGGGTGCCCATAGCTTTCATTGCCCTCTACTTCATCGTCCTCGTgtacgcctcc ... tgatgtgcagCGAGGGGAAGTCCAACCGCCGCATTCGTCGAGTG
EST: CTGCCTCGGGTGCCCATAGCTTTCATTGCCCTCTACTTCATCGTCCTCGT CGAGGGGAAGTCCAACCGCCGCEST: gi|88582977|gb|CI699445.1|CI699445
genomic: CTGCCTCGGGTGCCCATAGCTTTCATTGCCCTCTACTTCATCGTCCTCGTgtacgcctcc ... tgatgtgcagCGAGGGGAAGTCCAACCGCCGC
EST: CTGCCTCGGGTGCCCATAGCTTTCATTGCCCTCTACTTCATCGTCCTCGT CGAGGGGAAGTCCAACCGCCGCATTCGTCGAGTG
genomic: CTGCCTCGGGTGCCCATAGCTTTCATTGCCCTCTACTTCATCGTCCTCGTgtacgcctcc ... tgatgtgcagCGAGGGGAAGTCCAACCGCCGCATTCGTCGAGTG
aagggtacaagctttgttcatcatctgatgcgtgttctttgctattgatgtgcagCGAGGGGAAGTCCAACCGCCGCATTCGTCGAGTG
tattgat putative branch site (score: 3)
tattgat TA-rich tract