Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211200021|gb|FL079811.1|FL079811EST: GCCGCAGCAGGCTCAGGCTCCGCCCCTCTTCTTGGACTTCTCGCATGGAG ATTACGGCGGCGGGAGGAAGCGGCAGCGCGAGGCGGAG
genomic: GCCGCAGCAGGCTCAGGCTCCGCCCCTCTTCTTGGACTTCTCGCATGGAGgtaagcagat ... gtgcacatagATTACGGCGGCGGGAGGAAGCGGCAGCGCGAGGCGGAG
EST:
gi|5398727|gb|AI812192.1|AI812192EST: GCCGCAGCAGGCTCAGGCTCCGCCCCTCTTCTTGGACTTCTCGCATGGAG ATTACGGCGGCGGGAGGAAGCGTCAGCGCGAGGCGGAGCCCATGTCGTCGC
genomic: GCCGCAGCAGGCTCAGGCTCCGCCCCTCTTCTTGGACTTCTCGCATGGAGgtaagcagat ... gtgcacatagATTACGGCGGCGGGAGGAAGCGGCAGCGCGAGGCGGAGCCCATGTCGTCGC
EST:
gi|149090594|gb|EE179907.2|EE179907EST: GCCGCAGCAGGCTCAGGCTCCGCCCCTCTTCTTGGACTTCTCGCATGGAG ATTACGGCGGCGGGAGGAAGCGGCAGCGCGAGGCGGAGCCCATGTCGTCGC
genomic: GCCGCAGCAGGCTCAGGCTCCGCCCCTCTTCTTGGACTTCTCGCATGGAGgtaagcagat ... gtgcacatagATTACGGCGGCGGGAGGAAGCGGCAGCGCGAGGCGGAGCCCATGTCGTCGC
EST:
gi|211200018|gb|FL079808.1|FL079808EST: GCCGCAGCAGGCTCAGGCTCCGCCCCTCTTCTTGGACTTCTCGCATGGAG ATTACGGCGGCGGGAGG
genomic: GCCGCAGCAGGCTCAGGCTCCGCCCCTCTTCTTGGACTTCTCGCATGGAGgtaagcagat ... gtgcacatagATTACGGCGGCGGGAGG
EST:
gi|211200024|gb|FL079814.1|FL079814EST: GCCGCAGCAGGCTCAGGCTCCGCCC-TCTTCTTGGACTTCTCGCATGGAG ATTACGGCGGCGGGAGGAAGCGGCA
genomic: GCCGCAGCAGGCTCAGGCTCCGCCCCTCTTCTTGGACTTCTCGCATGGAGgtaagcagat ... gtgcacatagATTACGGCGGCGGGAGGAAGCGGCA
EST:
gi|211200020|gb|FL079810.1|FL079810EST: GCCGCAGCAGGCTCAGGCTCCGCCCCTCTTCTTGGACTTCTCGCATGGAG ATTACGGCGGCGGGAGGAAGCGGCAGCGCGAGGCGGAGCCCATGTCGTCGC
genomic: GCCGCAGCAGGCTCAGGCTCCGCCCCTCTTCTTGGACTTCTCGCATGGAGgtaagcagat ... gtgcacatagATTACGGCGGCGGGAGGAAGCGGCAGCGCGAGGCGGAGCCCATGTCGTCGC
EST:
gi|211200019|gb|FL079809.1|FL079809EST: GCCGCAGCAGGCTCAGGCTCCGCCCCTCTTCTTGGACTTCTCGCATGGAG ATTACGGCGGCGGGAGGAAGCGGCAGCGCGAGGCGGAGCCCATGTCGTCGC
genomic: GCCGCAGCAGGCTCAGGCTCCGCCCCTCTTCTTGGACTTCTCGCATGGAGgtaagcagat ... gtgcacatagATTACGGCGGCGGGAGGAAGCGGCAGCGCGAGGCGGAGCCCATGTCGTCGC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTGGCGGCGGCGATGGAGCTGCATCATCAGGCGCAGAAGGAGGCTATGGCGCCGCAGCAGGCTCAGGCTCCGCCCCTCTTCTTGGACTTCTCGCATGGAGgtaagcagatcaaacaaagcgcactccttggctccgcggcggatttcgtcttcttgggcagcagcaccgcacccttctgttccgatttcggatcgtgaaaaggtcgccggggacttaattgtcgggttgctgtgtgcacatag
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