Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtcatggtgatttcaattagtaccaactattataattatttgatagcatgcatgtttatttacaatgttttattgtagGCGGAAATAGTGGTAGTAGAGGGGGTGCCCTTGGTGCCAGTGCGTCTGCTCCTGCTAGGGCAGCGCCCAGTCTTCCACAATCGACCCATATTCGTCCAAG

Basic information

species Zea mays
transcript GRMZM5G858300_T01
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

caactattataattatttgatagcatgcatgtttatttacaatgttttattgtagGCGGAAATAGTGGTAGTAGAGGGGGTGCCCTTGGTGCCAGTGCGTCTGCTCCTGCTAGGGCAGCGCCCAGTCTTCCACAATCGACCCATATTCGTCCAAG
              atttgat  putative branch site (score: 5)
                                            ttttatt  putative PPT
                            atgtttatttacaatg  TA-rich tract