1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TTGGAGAAATTGTCCGGAGGATCCTGCTGAAACTGGCTCATGATGCTTCATTGTTTGGGGATGTTGTTCCTCCGAAACTGGAACAGCTATTTATACTGAGgtttactttcacgttccatcctctaacaatattgcttttcttatatttgtagaatacacaaaaatccaaaatcaacttatataaaggtgcacacatattt...
species | Zea mays |
transcript | GRMZM5G856653_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TTGTTTGGGGATGTTGTTCCTCCGAAACTGGAACAGCTATTTATACTGAG GACGCCAGATATGTCAGCCATGCACCATGACACCTCACATGATCTCAAACAEST: gi|76282305|gb|DV021873.1|DV021873
genomic: TTGTTTGGGGATGTTGTTCCTCCGAAACTGGAACAGCTATTTATACTGAGgtttactttc ... gatatggcagGACGCCAGATATGTCAGCCATGCACCATGACACCTCACATGATCTCAAACA
EST: TTGTTTGGGGATGTTGTTCCTCCGAAACTGGAACAGCTATTTATACTGAG GACGCCAGATATGTCAGCCATGCACCATGACACCTCACATGATCTCAAACAEST: gi|211437009|gb|FL298821.1|FL298821
genomic: TTGTTTGGGGATGTTGTTCCTCCGAAACTGGAACAGCTATTTATACTGAGgtttactttc ... gatatggcagGACGCCAGATATGTCAGCCATGCACCATGACACCTCACATGATCTCAAACA
EST: TTGTTTGGGGATGTTGTTCCTCCGAAACTGGAACAGCTATTTATACTGAG GACGCCAGATATGTCAGCCATGCACCATGWACACCTCACATGATCTCAAACEST: gi|211437010|gb|FL298822.1|FL298822
genomic: TTGTTTGGGGATGTTGTTCCTCCGAAACTGGAACAGCTATTTATACTGAGgtttactttc ... gatatggcagGACGCCAGATATGTCAGCCATGCACCATG-ACACCTCACATGATCTCAAAC
EST: TTGTTTGGGGATGTTGTTCCTCCGAAACTGGAACAGCTATTTATACTGAG GACGCCAGATATGTCAGCCATGCACCATGACACCTCACATGATCTCAAACA
genomic: TTGTTTGGGGATGTTGTTCCTCCGAAACTGGAACAGCTATTTATACTGAGgtttactttc ... gatatggcagGACGCCAGATATGTCAGCCATGCACCATGACACCTCACATGATCTCAAACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGGAGAAATTGTCCGGAGGATCCTGCTGAAACTGGCTCATGATGCTTCATTGTTTGGGGATGTTGTTCCTCCGAAACTGGAACAGCTATTTATACTGAGgtttactttcacgttccatcctctaacaatattgcttttcttatatttgtagaatacacaaaaatccaaaatcaacttatataaaggtgcacacatattt
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