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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaacatctttagcatcacatcatatcattgcgcttctcccccttgtttgtgcccctttattaattacaatcttttctcagAATGCCCCTACTCAATCACTTCTTAGAGTTGTTAATGGCATTCTAGATGAGAG

Basic information

species Zea mays
transcript GRMZM5G807582_T01
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cattgcgcttctcccccttgtttgtgcccctttattaattacaatcttttctcagAATGCCCCTACTCAATCACTTCTTAGAGTTGTTAATGGCATTCTAGATGAGAG
                                tattaat  putative branch site (score: 2)
                                            tcttttctc  putative PPT
                              tttattaattacaatc  TA-rich tract