1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GTTATCAGACTTCCTTGGTAGGATGGATCTTTAGGGACCAGCAGCTGTATTGATATCAAATgtaagatccacttttagtgcccagtctgcatcaatattctatttctggccaaataatccaatatgcaatgcatgcctagaaatgccatttttattttcta...
species | Zea mays |
transcript | GRMZM2G395842_T01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GGATGGATCTTTAGGGACCAGCAGCTGTATTGATATCAAAT TTTGAAGATCTCCATGGTCCTGTAGATGCTGGGATTACCTTTTCAGAGCACEST: gi|101389162|gb|EB816536.1|EB816536
genomic: GGATGGATCTTTAGGGACCAGCAGCTGTATTGATATCAAATgtaagatcca ... aatcagaaagTTTGAAGATCTCCATGGTCCTGTAGATGCTGGGATTACCTTTTCAGAGCAC
EST: TCCTTGGTAGGATGGATCTTTAGGGACCAGCAGCGGTATTGATATCAAAT TTTGAAGATCTCCATGGTCCTGTAGATGCTGGGATTACCTTTTCAGAGCACEST: gi|67020621|gb|CO449370.1|CO449370
genomic: TCCTTGGTAGGATGGATCTTTAGGGACCAGCAGCTGTATTGATATCAAATgtaagatcca ... aatcagaaagTTTGAAGATCTCCATGGTCCTGTAGATGCTGGGATTACCTTTTCAGAGCAC
EST: TCCTTGGTAGGATGGATCTTTAGGGACCAGCAGCTGTATTGATATCAAAT AEST: gi|67020621|gb|CO449370.1|CO449370
genomic: TCCTTGGTAGGATGGATCTTTAGGGACCAGCAGCTGTATTGATATCAAATgtaagatcca ... aatcagaaag-
EST: TCCTTGGTAGGATGGATCTTTAGGGACCAGCAGCTGTATTGATATCAAAT AEST: gi|67020621|gb|CO449370.1|CO449370
genomic: TCCTTGGTAGGATGGATCTTTAGGGACCAGCAGCTGTATTGATATCAAATgtaagatcca ... aatcagaaag-
EST: TCCTTGGTAGGATGGATCTTTAGGGACCAGCAGCTGTATTGATATCAAAT AEST: gi|67020621|gb|CO449370.1|CO449370
genomic: TCCTTGGTAGGATGGATCTTTAGGGACCAGCAGCTGTATTGATATCAAATgtaagatcca ... aatcagaaag-
EST: TCCTTGGTAGGATGGATCTTTAGGGACCAGCAGCTGTATTGATATCAAAT AEST: gi|67020621|gb|CO449370.1|CO449370
genomic: TCCTTGGTAGGATGGATCTTTAGGGACCAGCAGCTGTATTGATATCAAATgtaagatcca ... aatcagaaag-
EST: TCCTTGGTAGGATGGATCTTTAGGGACCAGCAGCTGTATTGATATCAAAT A
genomic: TCCTTGGTAGGATGGATCTTTAGGGACCAGCAGCTGTATTGATATCAAATgtaagatcca ... aatcagaaag-
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTATCAGACTTCCTTGGTAGGATGGATCTTTAGGGACCAGCAGCTGTATTGATATCAAATgtaagatccacttttagtgcccagtctgcatcaatattctatttctggccaaataatccaatatgcaatgcatgcctagaaatgccatttttattttcta
- - - - - - - - - AGGATG
- - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - CAGCTG